Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 MIR4270-201ENST00000581799 70 ntBASIC5.09□□□□□ -1.59
CLDN5O00501 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.09□□□□□ -1.59
CLDN5O00501 OR7M1P-201ENST00000608946 533 ntBASIC5.09□□□□□ -1.59
CLDN5O00501 MIR6853-201ENST00000619642 74 ntBASIC5.09□□□□□ -1.59
CLDN5O00501 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.09□□□□□ -1.59
CLDN5O00501 AC073869.7-201ENST00000640874 297 ntBASIC5.09□□□□□ -1.59
CLDN5O00501 AC073869.10-201ENST00000642016 354 ntBASIC5.09□□□□□ -1.59
CLDN5O00501 TLK1P1-201ENST00000456760 2440 ntBASIC5.09□□□□□ -1.59
CLDN5O00501 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
CLDN5O00501 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CLDN5O00501 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN5O00501 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN5O00501 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN5O00501 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN5O00501 AC011755.1-201ENST00000623763 2049 ntBASIC5.08□□□□□ -1.6
CLDN5O00501 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN5O00501 RNVU1-6-201ENST00000364688 164 ntBASIC5.08□□□□□ -1.6
CLDN5O00501 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN5O00501 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CLDN5O00501 RNU1-82P-201ENST00000390851 165 ntBASIC5.08□□□□□ -1.6
CLDN5O00501 RPL37P18-201ENST00000411602 243 ntBASIC5.08□□□□□ -1.6
CLDN5O00501 AC019050.1-201ENST00000418508 492 ntBASIC5.08□□□□□ -1.6
CLDN5O00501 LINC00993-201ENST00000420453 540 ntBASIC5.08□□□□□ -1.6
CLDN5O00501 REREP1Y-201ENST00000422655 198 ntBASIC5.08□□□□□ -1.6
CLDN5O00501 FABP7P1-201ENST00000424004 391 ntBASIC5.08□□□□□ -1.6
CLDN5O00501 VTI1BP4-201ENST00000427516 527 ntBASIC5.08□□□□□ -1.6
CLDN5O00501 REREP2Y-201ENST00000439103 200 ntBASIC5.08□□□□□ -1.6
CLDN5O00501 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.08□□□□□ -1.6
CLDN5O00501 FCF1P7-201ENST00000451185 558 ntBASIC5.08□□□□□ -1.6
CLDN5O00501 MTND6P32-201ENST00000457611 483 ntBASIC5.08□□□□□ -1.6
CLDN5O00501 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.08□□□□□ -1.6
CLDN5O00501 AC007686.1-201ENST00000488511 463 ntBASIC5.08□□□□□ -1.6
CLDN5O00501 AC008897.1-201ENST00000494006 347 ntBASIC5.08□□□□□ -1.6
CLDN5O00501 SCARNA22-201ENST00000503991 125 ntBASIC5.08□□□□□ -1.6
CLDN5O00501 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.08□□□□□ -1.6
CLDN5O00501 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.08□□□□□ -1.6
CLDN5O00501 RNA5SP230-201ENST00000517039 122 ntBASIC5.08□□□□□ -1.6
CLDN5O00501 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.08□□□□□ -1.6
CLDN5O00501 BUD31P1-201ENST00000521828 359 ntBASIC5.08□□□□□ -1.6
CLDN5O00501 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.08□□□□□ -1.6
CLDN5O00501 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.08□□□□□ -1.6
CLDN5O00501 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.08□□□□□ -1.6
CLDN5O00501 AC073342.3-201ENST00000624211 193 ntBASIC5.08□□□□□ -1.6
CLDN5O00501 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.08□□□□□ -1.6
CLDN5O00501 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN5O00501 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN5O00501 Z95331.1-201ENST00000623075 23112 ntBASIC5.08□□□□□ -1.6
CLDN5O00501 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CLDN5O00501 SOCS5P3-201ENST00000425115 1576 ntBASIC5.08□□□□□ -1.6
CLDN5O00501 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.08□□□□□ -1.6
CLDN5O00501 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN5O00501 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN5O00501 AC104623.2-202ENST00000623477 4002 ntBASIC5.07□□□□□ -1.6
CLDN5O00501 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.07□□□□□ -1.6
CLDN5O00501 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CLDN5O00501 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CLDN5O00501 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.07□□□□□ -1.6
CLDN5O00501 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CLDN5O00501 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN5O00501 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.07□□□□□ -1.6
CLDN5O00501 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CLDN5O00501 AL590240.1-201ENST00000334118 313 ntBASIC5.07□□□□□ -1.6
CLDN5O00501 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN5O00501 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN5O00501 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN5O00501 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN5O00501 SEPT7P8-201ENST00000413308 775 ntBASIC5.07□□□□□ -1.6
CLDN5O00501 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.07□□□□□ -1.6
CLDN5O00501 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.07□□□□□ -1.6
CLDN5O00501 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.07□□□□□ -1.6
CLDN5O00501 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.07□□□□□ -1.6
CLDN5O00501 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.07□□□□□ -1.6
CLDN5O00501 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.07□□□□□ -1.6
CLDN5O00501 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.07□□□□□ -1.6
CLDN5O00501 RPS5P7-201ENST00000456664 608 ntBASIC5.07□□□□□ -1.6
CLDN5O00501 ASNSP4-201ENST00000511103 447 ntBASIC5.07□□□□□ -1.6
CLDN5O00501 RN7SKP34-201ENST00000516142 244 ntBASIC5.07□□□□□ -1.6
CLDN5O00501 Y_RNA.719-201ENST00000517156 106 ntBASIC5.07□□□□□ -1.6
CLDN5O00501 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.07□□□□□ -1.6
CLDN5O00501 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.07□□□□□ -1.6
CLDN5O00501 BNIP3P1-201ENST00000547295 580 ntBASIC5.07□□□□□ -1.6
CLDN5O00501 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.07□□□□□ -1.6
CLDN5O00501 AC137768.1-201ENST00000549998 553 ntBASIC5.07□□□□□ -1.6
CLDN5O00501 AL049830.4-201ENST00000555149 351 ntBASIC5.07□□□□□ -1.6
CLDN5O00501 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.07□□□□□ -1.6
CLDN5O00501 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.07□□□□□ -1.6
CLDN5O00501 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.07□□□□□ -1.6
CLDN5O00501 AC125494.2-201ENST00000602431 657 ntBASIC5.07□□□□□ -1.6
CLDN5O00501 AC098935.2-201ENST00000604222 466 ntBASIC5.07□□□□□ -1.6
CLDN5O00501 AL161616.1-201ENST00000611867 286 ntBASIC5.07□□□□□ -1.6
CLDN5O00501 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN5O00501 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN5O00501 AC012414.7-202ENST00000622705 1090 ntBASIC5.07□□□□□ -1.6
CLDN5O00501 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.07□□□□□ -1.6
CLDN5O00501 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN5O00501 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.07□□□□□ -1.6
CLDN5O00501 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN5O00501 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CLDN5O00501 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN5O00501 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms