Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 RNU6-232P-201ENST00000517144 64 ntBASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 SEPT10P1-201ENST00000517342 1162 ntBASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 NAT2-202ENST00000520116 716 ntTSL 3 BASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 KCTD9P4-201ENST00000526766 1166 ntBASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 RFPL1S-203ENST00000539579 330 ntBASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 NBEAP1-201ENST00000554452 979 ntBASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 OR11H3P-201ENST00000554547 982 ntBASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 OR4H6P-201ENST00000563771 921 ntBASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 AC103987.3-201ENST00000582071 292 ntBASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 AP001542.2-201ENST00000593141 364 ntBASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 AL353600.1-201ENST00000608148 251 ntBASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 AL158163.2-201ENST00000619110 700 ntBASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.98□□□□□ -1.29
ZNRF3Q9ULT6 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 AC007938.2-201ENST00000604666 2634 ntBASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 AC107980.1-201ENST00000558671 3355 ntBASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 RN7SKP115-201ENST00000363177 317 ntBASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 RNU4-2-201ENST00000365668 141 ntBASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 Y_RNA.465-201ENST00000384293 102 ntBASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 MIR765-201ENST00000390226 114 ntBASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 SNORA40.2-201ENST00000390847 128 ntBASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 AL035419.1-201ENST00000397037 564 ntBASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 AC136624.1-201ENST00000400791 413 ntBASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 METTL15P3-201ENST00000415522 1221 ntBASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 RBMY2KP-201ENST00000418221 992 ntBASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 ISCA1P2-201ENST00000438679 421 ntBASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 RNU7-140P-201ENST00000459546 60 ntBASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 RPL7AP6-201ENST00000477943 801 ntBASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 AC079080.1-201ENST00000479841 822 ntBASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 NAA50-206ENST00000493454 964 ntTSL 2 BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 HIGD1AP18-201ENST00000520730 278 ntBASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 DPPA3P2-202ENST00000557188 1219 ntBASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 AC095057.3-201ENST00000567102 1157 ntBASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 IMMTP1-201ENST00000435590 2219 ntBASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 ZNF542P-204ENST00000482727 1305 ntBASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 AC087516.1-201ENST00000561236 2428 ntBASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ZNRF3Q9ULT6 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
ZNRF3Q9ULT6 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
ZNRF3Q9ULT6 AC119674.1-213ENST00000641177 1386 ntBASIC6.96□□□□□ -1.29
ZNRF3Q9ULT6 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
ZNRF3Q9ULT6 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.29
ZNRF3Q9ULT6 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.29
ZNRF3Q9ULT6 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
ZNRF3Q9ULT6 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
ZNRF3Q9ULT6 LINC01963-201ENST00000562038 3148 ntBASIC6.96□□□□□ -1.3
ZNRF3Q9ULT6 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC6.96□□□□□ -1.3
ZNRF3Q9ULT6 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms