Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 MIR6133-201ENST00000617057 108 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AC241377.1-201ENST00000619797 406 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AP000676.3-201ENST00000623299 569 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 SNORA17.5-201ENST00000630429 132 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 DDX18P6-201ENST00000450119 1997 ntBASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.43□□□□□ -1.54
AMBRA1Q9C0C7 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 SNORD113-6-201ENST00000363345 75 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 AL672167.2-201ENST00000377164 879 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 U3.23-201ENST00000391132 200 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 RN7SKP182-201ENST00000410772 298 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 HSFY4P-201ENST00000415994 1181 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 LINC01347-201ENST00000417964 355 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 SETP9-201ENST00000423837 832 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 C1DP1-201ENST00000426049 402 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 AL359265.1-201ENST00000440296 795 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 TRIM60P16-201ENST00000444048 694 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 AL035407.2-201ENST00000454090 378 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 HSPE1P22-201ENST00000456856 327 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 AC004129.2-201ENST00000457229 287 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 AC069528.1-202ENST00000482888 637 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 RPS4XP14-201ENST00000493072 781 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 RN7SL101P-201ENST00000496350 279 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 CDH12P2-201ENST00000504393 298 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 HPRT1P2-201ENST00000505250 544 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 GAPDHP62-201ENST00000515313 990 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 IGKV3D-25-201ENST00000519599 235 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 HMGB1P1-201ENST00000522557 636 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 OR5AK3P-201ENST00000527486 1297 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 MTND2P26-201ENST00000528255 1029 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 AL354943.1-201ENST00000572103 781 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 DPRXP5-201ENST00000604662 539 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 HIRAP1-201ENST00000605318 787 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 AL512652.1-201ENST00000619006 500 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 AC024023.1-201ENST00000624530 922 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 AC020656.2-201ENST00000613291 5309 ntBASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.42□□□□□ -1.54
AMBRA1Q9C0C7 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 MAPK10-328ENST00000641553 4009 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 GNL2P1-201ENST00000451274 2190 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 COX6B1P3-201ENST00000312310 260 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 434.4 ms