Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
USB1Q9BQ65 AL606923.1-201ENST00000406616 190 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 RNU2-6P-201ENST00000411404 190 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 AP000534.2-201ENST00000412729 568 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 AC126124.1-201ENST00000426104 185 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 AL669831.1-202ENST00000428504 417 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC7.15□□□□□ -1.26
USB1Q9BQ65 RPS20P5-201ENST00000434808 360 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.15□□□□□ -1.26
USB1Q9BQ65 AC234771.4-201ENST00000441416 730 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.15□□□□□ -1.26
USB1Q9BQ65 RPSAP54-201ENST00000454001 886 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 NUTF2P4-201ENST00000458353 381 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 PABPC1P3-201ENST00000469174 459 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.15□□□□□ -1.26
USB1Q9BQ65 RPL7P6-201ENST00000480903 738 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.15□□□□□ -1.26
USB1Q9BQ65 AC110794.1-201ENST00000505816 425 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 KRT18P54-201ENST00000513396 748 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 LIAS-206ENST00000513731 826 ntTSL 5 BASIC7.15□□□□□ -1.26
USB1Q9BQ65 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC7.15□□□□□ -1.26
USB1Q9BQ65 RNU6-566P-201ENST00000516790 107 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 AC091982.1-201ENST00000518134 520 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 PTK2-241ENST00000522950 548 ntTSL 4 BASIC7.15□□□□□ -1.26
USB1Q9BQ65 AC087280.1-201ENST00000530632 1003 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC7.15□□□□□ -1.26
USB1Q9BQ65 AC090287.1-201ENST00000578374 291 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 MIR3689C-201ENST00000581239 72 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 AC069061.3-201ENST00000582254 823 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 AF038458.1-201ENST00000588406 262 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC7.15□□□□□ -1.26
USB1Q9BQ65 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC7.15□□□□□ -1.26
USB1Q9BQ65 YTHDF2P1-201ENST00000604759 1271 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 AL592436.1-201ENST00000605135 558 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC7.15□□□□□ -1.26
USB1Q9BQ65 AC104184.1-201ENST00000607513 721 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 AC100812.1-201ENST00000607622 580 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC7.15□□□□□ -1.26
USB1Q9BQ65 uc_338.33-201ENST00000614988 170 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 FAM157A-202ENST00000615155 405 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 AC074029.3-201ENST00000618623 312 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 RN7SL113P-201ENST00000619959 299 ntBASIC7.15□□□□□ -1.26
USB1Q9BQ65 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC7.15□□□□□ -1.26
USB1Q9BQ65 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC7.15□□□□□ -1.26
USB1Q9BQ65 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.15□□□□□ -1.26
USB1Q9BQ65 UIMC1-211ENST00000510698 1334 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
USB1Q9BQ65 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
USB1Q9BQ65 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
USB1Q9BQ65 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
USB1Q9BQ65 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.15□□□□□ -1.27
USB1Q9BQ65 ZNF519P1-201ENST00000449011 1626 ntBASIC7.15□□□□□ -1.27
USB1Q9BQ65 FMO5-203ENST00000441068 1696 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
USB1Q9BQ65 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
USB1Q9BQ65 AC012360.3-201ENST00000610036 3449 ntBASIC7.15□□□□□ -1.27
USB1Q9BQ65 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
USB1Q9BQ65 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC7.15□□□□□ -1.27
USB1Q9BQ65 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
USB1Q9BQ65 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
USB1Q9BQ65 AL121950.1-201ENST00000624993 2077 ntBASIC7.15□□□□□ -1.27
USB1Q9BQ65 TANK-205ENST00000405852 2155 ntTSL 5 BASIC7.15□□□□□ -1.27
USB1Q9BQ65 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
USB1Q9BQ65 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
USB1Q9BQ65 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
USB1Q9BQ65 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
USB1Q9BQ65 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
USB1Q9BQ65 CEACAM7-201ENST00000006724 2489 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
USB1Q9BQ65 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.15□□□□□ -1.27
USB1Q9BQ65 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
USB1Q9BQ65 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
USB1Q9BQ65 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 FAM205BP-202ENST00000399773 4009 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
USB1Q9BQ65 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USB1Q9BQ65 GLYAT-202ENST00000344743 1735 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USB1Q9BQ65 RNU6-1115P-201ENST00000362490 106 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 RNU6-984P-201ENST00000363236 109 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 Y_RNA.367-201ENST00000365544 101 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
USB1Q9BQ65 CFAP58-202ENST00000369704 3313 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
USB1Q9BQ65 EFCAB7-201ENST00000371088 2313 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USB1Q9BQ65 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
USB1Q9BQ65 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USB1Q9BQ65 Y_RNA.489-201ENST00000384410 101 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 AC133644.1-201ENST00000398171 937 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
USB1Q9BQ65 STAG3L1-201ENST00000404291 496 ntTSL 3 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 RNU6ATAC23P-201ENST00000408448 123 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 MTATP6P29-201ENST00000415057 132 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 ARL5AP1-201ENST00000418991 388 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 PIGX-204ENST00000421265 677 ntTSL 2 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 AL731892.1-201ENST00000437364 1192 ntBASIC7.14□□□□□ -1.27
USB1Q9BQ65 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC7.14□□□□□ -1.27
USB1Q9BQ65 AC007790.1-201ENST00000439081 782 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms