Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 MRRFP1-201ENST00000435941 1675 ntBASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 RNA5SP319-201ENST00000362768 119 ntBASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 SNORD56.4-201ENST00000363883 71 ntBASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 ANAPC10P1-201ENST00000395991 556 ntBASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 NDUFB4P8-201ENST00000435351 367 ntBASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 AC019185.1-201ENST00000442718 389 ntBASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 EXOSC3P1-201ENST00000448649 500 ntBASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 RN7SL51P-201ENST00000468230 285 ntBASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 AC117394.1-201ENST00000477323 567 ntBASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 RPS3AP6-201ENST00000484430 795 ntBASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 RNU6-1308P-201ENST00000516817 103 ntBASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 SCARNA16.4-201ENST00000516956 187 ntBASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 TMEM97P2-201ENST00000517841 403 ntBASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 AC079064.1-201ENST00000528365 362 ntBASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 CYB5AP5-201ENST00000549779 389 ntBASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 MIR3614-201ENST00000581261 86 ntBASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 AC012557.1-201ENST00000607115 611 ntBASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 AC126175.1-201ENST00000617041 758 ntBASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 AC073869.8-201ENST00000641806 335 ntBASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.15□□□□□ -1.43
CDK5RAP3Q96JB5 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDK5RAP3Q96JB5 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
CDK5RAP3Q96JB5 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.15□□□□□ -1.43
CDK5RAP3Q96JB5 HSPA8P17-201ENST00000427029 1382 ntBASIC6.15□□□□□ -1.43
CDK5RAP3Q96JB5 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.15□□□□□ -1.43
CDK5RAP3Q96JB5 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 SPATA2P1-201ENST00000431223 2055 ntBASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 Z95331.1-201ENST00000623075 23112 ntBASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 RN7SKP145-201ENST00000363291 303 ntBASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 RN7SKP15-201ENST00000364742 309 ntBASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 SNORA17A-201ENST00000391185 133 ntBASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 CHMP1B2P-201ENST00000399581 597 ntBASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 AL034374.1-201ENST00000406329 351 ntBASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 HMGB3P5-201ENST00000428894 612 ntBASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 MTND2P40-201ENST00000436718 841 ntBASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 ARF4P4-201ENST00000439608 520 ntBASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 AC073909.1-201ENST00000447112 999 ntBASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 TPT1P1-201ENST00000458495 518 ntBASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 AC021205.1-201ENST00000468797 348 ntBASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 AC109464.1-201ENST00000511091 819 ntBASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.14□□□□□ -1.43
CDK5RAP3Q96JB5 AC015720.2-201ENST00000567709 334 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms