Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TOPBP1Q92547 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TOPBP1Q92547 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TOPBP1Q92547 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC7.82□□□□□ -1.16
TOPBP1Q92547 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
TOPBP1Q92547 SNORA11F-201ENST00000408237 128 ntBASIC7.82□□□□□ -1.16
TOPBP1Q92547 RN7SKP17-201ENST00000411242 351 ntBASIC7.82□□□□□ -1.16
TOPBP1Q92547 CYCSP19-201ENST00000411715 316 ntBASIC7.82□□□□□ -1.16
TOPBP1Q92547 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
TOPBP1Q92547 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC7.82□□□□□ -1.16
TOPBP1Q92547 RGS5-218ENST00000526176 574 ntTSL 4 BASIC7.82□□□□□ -1.16
TOPBP1Q92547 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC7.82□□□□□ -1.16
TOPBP1Q92547 IPO5P1-202ENST00000600039 287 ntBASIC7.82□□□□□ -1.16
TOPBP1Q92547 AP003497.2-201ENST00000624220 967 ntBASIC7.82□□□□□ -1.16
TOPBP1Q92547 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TOPBP1Q92547 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TOPBP1Q92547 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TOPBP1Q92547 EIF2AP4-201ENST00000424793 1781 ntBASIC7.81□□□□□ -1.16
TOPBP1Q92547 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
TOPBP1Q92547 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC7.81□□□□□ -1.16
TOPBP1Q92547 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TOPBP1Q92547 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
TOPBP1Q92547 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TOPBP1Q92547 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
TOPBP1Q92547 AC008033.1-201ENST00000216407 1162 ntBASIC7.81□□□□□ -1.16
TOPBP1Q92547 F11-205ENST00000492972 1204 ntTSL 2 BASIC7.81□□□□□ -1.16
TOPBP1Q92547 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
TOPBP1Q92547 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TOPBP1Q92547 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC7.81□□□□□ -1.16
TOPBP1Q92547 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC7.81□□□□□ -1.16
TOPBP1Q92547 PRPF19P1-201ENST00000584766 898 ntBASIC7.81□□□□□ -1.16
TOPBP1Q92547 AC090506.2-201ENST00000624521 419 ntBASIC7.81□□□□□ -1.16
TOPBP1Q92547 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TOPBP1Q92547 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TOPBP1Q92547 AC005261.4-201ENST00000600047 1385 ntBASIC7.81□□□□□ -1.16
TOPBP1Q92547 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TOPBP1Q92547 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TOPBP1Q92547 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.8□□□□□ -1.16
TOPBP1Q92547 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TOPBP1Q92547 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.8□□□□□ -1.16
TOPBP1Q92547 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
TOPBP1Q92547 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TOPBP1Q92547 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TOPBP1Q92547 MIR670-201ENST00000390142 98 ntBASIC7.8□□□□□ -1.16
TOPBP1Q92547 AL356095.1-201ENST00000417217 199 ntBASIC7.8□□□□□ -1.16
TOPBP1Q92547 AL451139.1-201ENST00000434718 346 ntBASIC7.8□□□□□ -1.16
TOPBP1Q92547 RNU1-45P-201ENST00000517191 141 ntBASIC7.8□□□□□ -1.16
TOPBP1Q92547 AC006453.5-201ENST00000636451 619 ntBASIC7.8□□□□□ -1.16
TOPBP1Q92547 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.8□□□□□ -1.16
TOPBP1Q92547 AL033543.1-201ENST00000623440 13454 ntBASIC7.8□□□□□ -1.16
TOPBP1Q92547 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC7.8□□□□□ -1.16
TOPBP1Q92547 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TOPBP1Q92547 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TOPBP1Q92547 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TOPBP1Q92547 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
TOPBP1Q92547 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TOPBP1Q92547 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC7.8□□□□□ -1.16
TOPBP1Q92547 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
TOPBP1Q92547 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TOPBP1Q92547 RPS27AP11-201ENST00000402798 447 ntBASIC7.79□□□□□ -1.16
TOPBP1Q92547 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC7.79□□□□□ -1.16
TOPBP1Q92547 PRPF38AP1-201ENST00000451976 933 ntBASIC7.79□□□□□ -1.16
TOPBP1Q92547 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC7.79□□□□□ -1.16
TOPBP1Q92547 AC111000.6-201ENST00000514471 709 ntBASIC7.79□□□□□ -1.16
TOPBP1Q92547 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC7.79□□□□□ -1.16
TOPBP1Q92547 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC7.79□□□□□ -1.16
TOPBP1Q92547 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC7.79□□□□□ -1.16
TOPBP1Q92547 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC7.79□□□□□ -1.16
TOPBP1Q92547 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
TOPBP1Q92547 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
TOPBP1Q92547 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TOPBP1Q92547 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TOPBP1Q92547 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
TOPBP1Q92547 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
TOPBP1Q92547 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TOPBP1Q92547 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.79□□□□□ -1.16
TOPBP1Q92547 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
TOPBP1Q92547 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC7.78□□□□□ -1.16
TOPBP1Q92547 COX6CP15-201ENST00000426313 211 ntBASIC7.78□□□□□ -1.16
TOPBP1Q92547 AC011998.1-201ENST00000433403 117 ntBASIC7.78□□□□□ -1.16
TOPBP1Q92547 DHFRP3-201ENST00000455595 559 ntBASIC7.78□□□□□ -1.16
TOPBP1Q92547 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC7.78□□□□□ -1.16
TOPBP1Q92547 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TOPBP1Q92547 AC136777.2-201ENST00000522979 358 ntBASIC7.78□□□□□ -1.16
TOPBP1Q92547 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC7.78□□□□□ -1.16
TOPBP1Q92547 AC040958.1-201ENST00000561102 201 ntBASIC7.78□□□□□ -1.16
TOPBP1Q92547 AC010547.7-201ENST00000570323 333 ntBASIC7.78□□□□□ -1.16
TOPBP1Q92547 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC7.78□□□□□ -1.16
TOPBP1Q92547 AC091979.2-201ENST00000607514 214 ntBASIC7.78□□□□□ -1.16
TOPBP1Q92547 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC7.78□□□□□ -1.16
TOPBP1Q92547 AC067931.1-201ENST00000624190 671 ntBASIC7.78□□□□□ -1.16
TOPBP1Q92547 LGI1-209ENST00000627699 664 ntTSL 3 BASIC7.78□□□□□ -1.16
TOPBP1Q92547 AC011447.7-201ENST00000624228 1590 ntBASIC7.78□□□□□ -1.16
TOPBP1Q92547 AL031119.1-201ENST00000404707 1879 ntBASIC7.78□□□□□ -1.16
TOPBP1Q92547 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TOPBP1Q92547 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
TOPBP1Q92547 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TOPBP1Q92547 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
TOPBP1Q92547 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC7.78□□□□□ -1.16
TOPBP1Q92547 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms