Protein–RNA interactions for Protein: Q0VFZ6

CCDC173, Coiled-coil domain-containing protein 173, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC173Q0VFZ6 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 RNU1-108P-201ENST00000362556 161 ntBASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 BMS1P3-201ENST00000372011 932 ntBASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 U3.35-201ENST00000408405 208 ntBASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 RPL35AP24-201ENST00000413846 330 ntBASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 AL450263.2-201ENST00000439400 589 ntBASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 RPL12P3-201ENST00000440080 396 ntBASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 AL691482.1-201ENST00000453255 87 ntBASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 RPS17P2-201ENST00000461663 408 ntBASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 RN7SL517P-201ENST00000462240 305 ntBASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 RN7SL329P-201ENST00000467740 299 ntBASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 RN7SL727P-201ENST00000482164 296 ntBASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 IGBP1P1-201ENST00000554337 1009 ntBASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 ECM1P2-201ENST00000503354 1577 ntBASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 PABPC1P6-201ENST00000445594 1829 ntBASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 MAPK10-303ENST00000641324 3959 ntBASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC173Q0VFZ6 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 RNA5SP90-201ENST00000364801 99 ntBASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 HCFC2P1-201ENST00000392864 1592 ntBASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 AL645927.1-201ENST00000396783 406 ntBASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 AL391422.1-201ENST00000402155 436 ntBASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 RNU6-233P-201ENST00000410845 141 ntBASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 AL160275.2-201ENST00000412010 394 ntBASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 AC073052.1-201ENST00000440417 714 ntBASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 AC114982.2-201ENST00000461396 358 ntBASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 RN7SL41P-201ENST00000476144 297 ntBASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 RN7SL547P-201ENST00000490793 290 ntBASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 AC147055.3-201ENST00000510547 851 ntBASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 AP002884.5-201ENST00000595053 1132 ntBASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 AP005131.7-201ENST00000610087 611 ntBASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 AC005840.5-201ENST00000619166 599 ntBASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 AP001005.3-201ENST00000622049 129 ntBASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC173Q0VFZ6 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC173Q0VFZ6 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC173Q0VFZ6 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC173Q0VFZ6 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC173Q0VFZ6 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC173Q0VFZ6 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC173Q0VFZ6 AC103591.2-201ENST00000265259 766 ntBASIC5.6□□□□□ -1.51
CCDC173Q0VFZ6 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC173Q0VFZ6 SNORA73.1-201ENST00000363107 205 ntBASIC5.6□□□□□ -1.51
CCDC173Q0VFZ6 RNA5SP507-201ENST00000363603 121 ntBASIC5.6□□□□□ -1.51
CCDC173Q0VFZ6 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC173Q0VFZ6 VDAC1P9-201ENST00000412766 841 ntBASIC5.6□□□□□ -1.51
CCDC173Q0VFZ6 AL356968.2-201ENST00000412769 1257 ntBASIC5.6□□□□□ -1.51
CCDC173Q0VFZ6 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC173Q0VFZ6 AL596448.1-201ENST00000415024 392 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms