Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 GUCY1B2-204ENST00000531898 1979 ntBASIC6.76□□□□□ -1.33
SOX4Q06945 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.76□□□□□ -1.33
SOX4Q06945 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.76□□□□□ -1.33
SOX4Q06945 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SOX4Q06945 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SOX4Q06945 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SOX4Q06945 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
SOX4Q06945 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.76□□□□□ -1.33
SOX4Q06945 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
SOX4Q06945 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SOX4Q06945 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.76□□□□□ -1.33
SOX4Q06945 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SOX4Q06945 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
SOX4Q06945 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.76□□□□□ -1.33
SOX4Q06945 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SOX4Q06945 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.76□□□□□ -1.33
SOX4Q06945 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.76□□□□□ -1.33
SOX4Q06945 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
SOX4Q06945 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.75□□□□□ -1.33
SOX4Q06945 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.75□□□□□ -1.33
SOX4Q06945 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.75□□□□□ -1.33
SOX4Q06945 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
SOX4Q06945 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.75□□□□□ -1.33
SOX4Q06945 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.75□□□□□ -1.33
SOX4Q06945 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.75□□□□□ -1.33
SOX4Q06945 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SOX4Q06945 AC092326.2-201ENST00000624772 1561 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 RN7SKP275-201ENST00000364626 301 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.75□□□□□ -1.33
SOX4Q06945 SNORA51.9-201ENST00000384295 124 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
SOX4Q06945 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.75□□□□□ -1.33
SOX4Q06945 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC6.75□□□□□ -1.33
SOX4Q06945 RPS26P38-201ENST00000414476 348 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 USP9YP20-201ENST00000419224 558 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC6.75□□□□□ -1.33
SOX4Q06945 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.75□□□□□ -1.33
SOX4Q06945 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
SOX4Q06945 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.75□□□□□ -1.33
SOX4Q06945 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC6.75□□□□□ -1.33
SOX4Q06945 AC002542.1-201ENST00000440683 193 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.75□□□□□ -1.33
SOX4Q06945 AC097499.1-201ENST00000444277 208 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.75□□□□□ -1.33
SOX4Q06945 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC6.75□□□□□ -1.33
SOX4Q06945 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC6.75□□□□□ -1.33
SOX4Q06945 PPIAP7-201ENST00000454070 489 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC6.75□□□□□ -1.33
SOX4Q06945 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC6.75□□□□□ -1.33
SOX4Q06945 UBTFL6-201ENST00000477929 1024 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 RPL23AP37-201ENST00000479658 549 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 RPL9P6-201ENST00000492764 598 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 AL358832.1-201ENST00000497800 389 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC6.75□□□□□ -1.33
SOX4Q06945 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.75□□□□□ -1.33
SOX4Q06945 ATP1B1P1-201ENST00000509767 915 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC6.75□□□□□ -1.33
SOX4Q06945 KCTD9P4-201ENST00000526766 1166 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 AP000620.1-201ENST00000527147 504 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 OR5AL2P-201ENST00000532185 920 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 AC092747.2-201ENST00000545069 983 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 AC073916.1-201ENST00000545095 130 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.75□□□□□ -1.33
SOX4Q06945 AC124947.2-202ENST00000552735 133 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 NPM1P5-201ENST00000557228 838 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.75□□□□□ -1.33
SOX4Q06945 ATP5F1P7-201ENST00000567330 760 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.75□□□□□ -1.33
SOX4Q06945 AC044792.1-201ENST00000593294 196 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC6.75□□□□□ -1.33
SOX4Q06945 AC020765.1-201ENST00000604296 328 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.75□□□□□ -1.33
SOX4Q06945 AC024255.1-201ENST00000614376 102 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 AL162377.2-201ENST00000624532 337 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 LRRC77P-213ENST00000637727 880 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SOX4Q06945 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SOX4Q06945 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.75□□□□□ -1.33
SOX4Q06945 AP002370.1-201ENST00000528055 1602 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SOX4Q06945 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
SOX4Q06945 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SOX4Q06945 AC022819.1-201ENST00000563495 3910 ntBASIC6.75□□□□□ -1.33
SOX4Q06945 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SOX4Q06945 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.75□□□□□ -1.33
SOX4Q06945 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
SOX4Q06945 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SOX4Q06945 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
SOX4Q06945 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
SOX4Q06945 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.74□□□□□ -1.33
SOX4Q06945 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SOX4Q06945 ABCA11P-202ENST00000504019 2110 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.74□□□□□ -1.33
SOX4Q06945 AC105235.1-201ENST00000623208 1816 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 AC092725.2-201ENST00000567658 1389 ntBASIC6.74□□□□□ -1.33
SOX4Q06945 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SOX4Q06945 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
SOX4Q06945 RNU1-49P-201ENST00000363468 159 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms