Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.37□□□□□ -1.55
SUMO3P55854 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SUMO3P55854 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.37□□□□□ -1.55
SUMO3P55854 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.37□□□□□ -1.55
SUMO3P55854 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.37□□□□□ -1.55
SUMO3P55854 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.37□□□□□ -1.55
SUMO3P55854 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.37□□□□□ -1.55
SUMO3P55854 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.37□□□□□ -1.55
SUMO3P55854 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.37□□□□□ -1.55
SUMO3P55854 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.37□□□□□ -1.55
SUMO3P55854 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.37□□□□□ -1.55
SUMO3P55854 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.37□□□□□ -1.55
SUMO3P55854 AC079905.1-201ENST00000549280 475 ntBASIC5.37□□□□□ -1.55
SUMO3P55854 NBEAP1-201ENST00000554452 979 ntBASIC5.37□□□□□ -1.55
SUMO3P55854 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.37□□□□□ -1.55
SUMO3P55854 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.37□□□□□ -1.55
SUMO3P55854 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.37□□□□□ -1.55
SUMO3P55854 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
SUMO3P55854 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.37□□□□□ -1.55
SUMO3P55854 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.37□□□□□ -1.55
SUMO3P55854 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SUMO3P55854 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.37□□□□□ -1.55
SUMO3P55854 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.37□□□□□ -1.55
SUMO3P55854 CDRT1-208ENST00000630868 794 ntBASIC5.37□□□□□ -1.55
SUMO3P55854 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
SUMO3P55854 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SUMO3P55854 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SUMO3P55854 PWAR1-201ENST00000624188 2414 ntBASIC5.37□□□□□ -1.55
SUMO3P55854 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.37□□□□□ -1.55
SUMO3P55854 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SUMO3P55854 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SUMO3P55854 AC022164.1-201ENST00000568767 2673 ntBASIC5.37□□□□□ -1.55
SUMO3P55854 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.37□□□□□ -1.55
SUMO3P55854 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SUMO3P55854 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
SUMO3P55854 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
SUMO3P55854 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SUMO3P55854 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SUMO3P55854 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.36□□□□□ -1.55
SUMO3P55854 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SUMO3P55854 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SUMO3P55854 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SUMO3P55854 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.36□□□□□ -1.55
SUMO3P55854 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SUMO3P55854 FAM133CP-201ENST00000332869 704 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 RN7SKP275-201ENST00000364626 301 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
SUMO3P55854 AC004386.1-201ENST00000393214 761 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 OR51A3P-201ENST00000413596 924 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.36□□□□□ -1.55
SUMO3P55854 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.36□□□□□ -1.55
SUMO3P55854 DYNLL1P7-201ENST00000429273 258 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 RPL12P16-201ENST00000431098 498 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.36□□□□□ -1.55
SUMO3P55854 EIF5AP4-201ENST00000441206 465 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.36□□□□□ -1.55
SUMO3P55854 HMGB1P48-201ENST00000446155 598 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.36□□□□□ -1.55
SUMO3P55854 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.36□□□□□ -1.55
SUMO3P55854 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.36□□□□□ -1.55
SUMO3P55854 RNU6-1218P-201ENST00000458990 108 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.36□□□□□ -1.55
SUMO3P55854 AC090058.1-201ENST00000498788 435 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.36□□□□□ -1.55
SUMO3P55854 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.36□□□□□ -1.55
SUMO3P55854 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.36□□□□□ -1.55
SUMO3P55854 AC026782.2-201ENST00000510845 636 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 RPL7L1P4-201ENST00000513004 707 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.36□□□□□ -1.55
SUMO3P55854 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.36□□□□□ -1.55
SUMO3P55854 FABP5P12-201ENST00000515543 389 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.36□□□□□ -1.55
SUMO3P55854 RN7SKP283-201ENST00000517197 270 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 SEPT10P1-201ENST00000517342 1162 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 AC060775.1-201ENST00000518241 520 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.36□□□□□ -1.55
SUMO3P55854 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.36□□□□□ -1.55
SUMO3P55854 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.36□□□□□ -1.55
SUMO3P55854 C1GALT1P3-201ENST00000522049 819 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.36□□□□□ -1.55
SUMO3P55854 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.36□□□□□ -1.55
SUMO3P55854 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.36□□□□□ -1.55
SUMO3P55854 AP001317.1-201ENST00000531194 960 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 AC027026.1-201ENST00000532323 742 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 OSBPL9P5-201ENST00000542581 171 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.36□□□□□ -1.55
SUMO3P55854 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.36□□□□□ -1.55
SUMO3P55854 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.36□□□□□ -1.55
SUMO3P55854 AL354943.1-201ENST00000572103 781 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.36□□□□□ -1.55
SUMO3P55854 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
SUMO3P55854 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.36□□□□□ -1.55
SUMO3P55854 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
SUMO3P55854 DPRXP5-201ENST00000604662 539 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 AL139344.1-201ENST00000605228 195 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 AC023813.4-201ENST00000607580 580 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 AP000255.1-201ENST00000610276 676 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 AC243654.2-201ENST00000612843 443 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.36□□□□□ -1.55
SUMO3P55854 AC112694.2-201ENST00000623697 768 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms