Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RNU6-1331P-201ENST00000363658 106 ntBASIC4.78□□□□□ -1.64
PKNOX1P55347 U3.25-201ENST00000391209 220 ntBASIC4.78□□□□□ -1.64
PKNOX1P55347 RN7SKP199-201ENST00000410325 305 ntBASIC4.78□□□□□ -1.64
PKNOX1P55347 VN1R31P-201ENST00000417498 730 ntBASIC4.78□□□□□ -1.64
PKNOX1P55347 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.78□□□□□ -1.64
PKNOX1P55347 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PKNOX1P55347 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.78□□□□□ -1.64
PKNOX1P55347 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.78□□□□□ -1.64
PKNOX1P55347 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.78□□□□□ -1.64
PKNOX1P55347 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.78□□□□□ -1.64
PKNOX1P55347 AL450263.2-201ENST00000439400 589 ntBASIC4.78□□□□□ -1.64
PKNOX1P55347 AC245047.2-201ENST00000441060 530 ntBASIC4.78□□□□□ -1.64
PKNOX1P55347 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.78□□□□□ -1.64
PKNOX1P55347 NDUFA5P8-201ENST00000449019 346 ntBASIC4.78□□□□□ -1.64
PKNOX1P55347 AL591363.1-201ENST00000450091 483 ntBASIC4.78□□□□□ -1.64
PKNOX1P55347 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.78□□□□□ -1.64
PKNOX1P55347 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
PKNOX1P55347 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.78□□□□□ -1.64
PKNOX1P55347 RN7SL244P-201ENST00000493405 297 ntBASIC4.78□□□□□ -1.64
PKNOX1P55347 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.78□□□□□ -1.64
PKNOX1P55347 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.78□□□□□ -1.64
PKNOX1P55347 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.78□□□□□ -1.64
PKNOX1P55347 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PKNOX1P55347 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.78□□□□□ -1.64
PKNOX1P55347 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.78□□□□□ -1.64
PKNOX1P55347 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.78□□□□□ -1.64
PKNOX1P55347 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.78□□□□□ -1.64
PKNOX1P55347 AC243960.7-201ENST00000623532 707 ntBASIC4.78□□□□□ -1.64
PKNOX1P55347 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PKNOX1P55347 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.78□□□□□ -1.64
PKNOX1P55347 RBPJP2-201ENST00000618187 1444 ntBASIC4.78□□□□□ -1.64
PKNOX1P55347 AC083843.3-201ENST00000623679 2186 ntBASIC4.78□□□□□ -1.64
PKNOX1P55347 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
PKNOX1P55347 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PKNOX1P55347 ZNF733P-202ENST00000444809 1573 ntBASIC4.78□□□□□ -1.64
PKNOX1P55347 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PKNOX1P55347 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
PKNOX1P55347 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PKNOX1P55347 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
PKNOX1P55347 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PKNOX1P55347 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.77□□□□□ -1.65
PKNOX1P55347 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PKNOX1P55347 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.77□□□□□ -1.65
PKNOX1P55347 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PKNOX1P55347 RNU6-729P-201ENST00000384399 107 ntBASIC4.77□□□□□ -1.65
PKNOX1P55347 SNORD96B-201ENST00000386148 79 ntBASIC4.77□□□□□ -1.65
PKNOX1P55347 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.77□□□□□ -1.65
PKNOX1P55347 Z97832.1-201ENST00000402490 328 ntBASIC4.77□□□□□ -1.65
PKNOX1P55347 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.77□□□□□ -1.65
PKNOX1P55347 MIR1286-201ENST00000408112 78 ntBASIC4.77□□□□□ -1.65
PKNOX1P55347 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.77□□□□□ -1.65
PKNOX1P55347 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.77□□□□□ -1.65
PKNOX1P55347 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.77□□□□□ -1.65
PKNOX1P55347 E2F6P2-201ENST00000420708 748 ntBASIC4.77□□□□□ -1.65
PKNOX1P55347 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.77□□□□□ -1.65
PKNOX1P55347 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PKNOX1P55347 AC002069.1-201ENST00000429649 1159 ntBASIC4.77□□□□□ -1.65
PKNOX1P55347 AL138787.1-202ENST00000437804 898 ntBASIC4.77□□□□□ -1.65
PKNOX1P55347 MTND4LP12-201ENST00000448237 295 ntBASIC4.77□□□□□ -1.65
PKNOX1P55347 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.77□□□□□ -1.65
PKNOX1P55347 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.77□□□□□ -1.65
PKNOX1P55347 RPL7AP10-201ENST00000481016 791 ntBASIC4.77□□□□□ -1.65
PKNOX1P55347 HMGN2P25-201ENST00000486956 268 ntBASIC4.77□□□□□ -1.65
PKNOX1P55347 SNRPCP2-201ENST00000504370 475 ntBASIC4.77□□□□□ -1.65
PKNOX1P55347 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.77□□□□□ -1.65
PKNOX1P55347 RNA5SP43-201ENST00000516559 110 ntBASIC4.77□□□□□ -1.65
PKNOX1P55347 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.77□□□□□ -1.65
PKNOX1P55347 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.77□□□□□ -1.65
PKNOX1P55347 AC084033.1-201ENST00000550830 633 ntBASIC4.77□□□□□ -1.65
PKNOX1P55347 AC011270.1-201ENST00000558606 583 ntBASIC4.77□□□□□ -1.65
PKNOX1P55347 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.77□□□□□ -1.65
PKNOX1P55347 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.77□□□□□ -1.65
PKNOX1P55347 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.77□□□□□ -1.65
PKNOX1P55347 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.77□□□□□ -1.65
PKNOX1P55347 AC067838.1-201ENST00000606064 577 ntBASIC4.77□□□□□ -1.65
PKNOX1P55347 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.77□□□□□ -1.65
PKNOX1P55347 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.77□□□□□ -1.65
PKNOX1P55347 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PKNOX1P55347 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PKNOX1P55347 THAP12P4-201ENST00000528321 2266 ntBASIC4.77□□□□□ -1.65
PKNOX1P55347 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
PKNOX1P55347 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PKNOX1P55347 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
PKNOX1P55347 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.77□□□□□ -1.65
PKNOX1P55347 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.77□□□□□ -1.65
PKNOX1P55347 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PKNOX1P55347 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PKNOX1P55347 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.76□□□□□ -1.65
PKNOX1P55347 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PKNOX1P55347 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PKNOX1P55347 SNURFL-201ENST00000309296 343 ntBASIC4.76□□□□□ -1.65
PKNOX1P55347 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PKNOX1P55347 AL512422.1-201ENST00000407033 553 ntBASIC4.76□□□□□ -1.65
PKNOX1P55347 U3.35-201ENST00000408405 208 ntBASIC4.76□□□□□ -1.65
PKNOX1P55347 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.76□□□□□ -1.65
PKNOX1P55347 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.76□□□□□ -1.65
PKNOX1P55347 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.76□□□□□ -1.65
PKNOX1P55347 RGS17P1-201ENST00000423358 553 ntBASIC4.76□□□□□ -1.65
PKNOX1P55347 FABP7P1-201ENST00000424004 391 ntBASIC4.76□□□□□ -1.65
PKNOX1P55347 AC092447.2-201ENST00000435487 669 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms