Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.9□□□□□ -1.62
HMGA1P17096 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMGA1P17096 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMGA1P17096 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMGA1P17096 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMGA1P17096 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.9□□□□□ -1.62
HMGA1P17096 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.9□□□□□ -1.62
HMGA1P17096 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMGA1P17096 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HMGA1P17096 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HMGA1P17096 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGA1P17096 SNORA62-201ENST00000365493 153 ntBASIC4.9□□□□□ -1.63
HMGA1P17096 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HMGA1P17096 UQCRBP1-201ENST00000421129 336 ntBASIC4.9□□□□□ -1.63
HMGA1P17096 AC104333.2-201ENST00000422630 192 ntBASIC4.9□□□□□ -1.63
HMGA1P17096 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.9□□□□□ -1.63
HMGA1P17096 RPL7P57-201ENST00000423238 740 ntBASIC4.9□□□□□ -1.63
HMGA1P17096 AC091390.1-201ENST00000433904 331 ntBASIC4.9□□□□□ -1.63
HMGA1P17096 YWHAZP2-201ENST00000440317 728 ntBASIC4.9□□□□□ -1.63
HMGA1P17096 BTF3P6-201ENST00000448054 499 ntBASIC4.9□□□□□ -1.63
HMGA1P17096 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.9□□□□□ -1.63
HMGA1P17096 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.9□□□□□ -1.63
HMGA1P17096 SNRPCP3-201ENST00000474888 476 ntBASIC4.9□□□□□ -1.63
HMGA1P17096 AC007016.1-201ENST00000512110 244 ntBASIC4.9□□□□□ -1.63
HMGA1P17096 AC068831.4-201ENST00000556118 109 ntBASIC4.9□□□□□ -1.63
HMGA1P17096 AC084783.1-201ENST00000565846 910 ntBASIC4.9□□□□□ -1.63
HMGA1P17096 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.9□□□□□ -1.63
HMGA1P17096 U3.53-201ENST00000628922 216 ntBASIC4.9□□□□□ -1.63
HMGA1P17096 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HMGA1P17096 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.9□□□□□ -1.63
HMGA1P17096 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
HMGA1P17096 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGA1P17096 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGA1P17096 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HMGA1P17096 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGA1P17096 MAPK10-328ENST00000641553 4009 ntBASIC4.9□□□□□ -1.63
HMGA1P17096 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HMGA1P17096 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
HMGA1P17096 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGA1P17096 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGA1P17096 ZNF137P-201ENST00000456718 1920 ntBASIC4.89□□□□□ -1.63
HMGA1P17096 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMGA1P17096 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGA1P17096 OR56B2P-202ENST00000641377 2453 ntBASIC4.89□□□□□ -1.63
HMGA1P17096 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGA1P17096 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.89□□□□□ -1.63
HMGA1P17096 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGA1P17096 AL121950.1-201ENST00000624993 2077 ntBASIC4.89□□□□□ -1.63
HMGA1P17096 AC021146.4-201ENST00000309229 279 ntBASIC4.89□□□□□ -1.63
HMGA1P17096 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGA1P17096 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.89□□□□□ -1.63
HMGA1P17096 U3.35-201ENST00000408405 208 ntBASIC4.89□□□□□ -1.63
HMGA1P17096 P2RY10P2-201ENST00000416730 913 ntBASIC4.89□□□□□ -1.63
HMGA1P17096 COX6CP17-201ENST00000421389 185 ntBASIC4.89□□□□□ -1.63
HMGA1P17096 RPL12P28-201ENST00000430852 489 ntBASIC4.89□□□□□ -1.63
HMGA1P17096 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGA1P17096 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGA1P17096 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGA1P17096 AL136455.1-201ENST00000441083 1240 ntBASIC4.89□□□□□ -1.63
HMGA1P17096 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.89□□□□□ -1.63
HMGA1P17096 RPL7AP10-201ENST00000481016 791 ntBASIC4.89□□□□□ -1.63
HMGA1P17096 AC025674.1-201ENST00000507074 324 ntBASIC4.89□□□□□ -1.63
HMGA1P17096 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.89□□□□□ -1.63
HMGA1P17096 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.89□□□□□ -1.63
HMGA1P17096 AC009643.1-201ENST00000532030 391 ntBASIC4.89□□□□□ -1.63
HMGA1P17096 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.89□□□□□ -1.63
HMGA1P17096 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.89□□□□□ -1.63
HMGA1P17096 AC008782.1-201ENST00000603386 430 ntBASIC4.89□□□□□ -1.63
HMGA1P17096 OR7A19P-201ENST00000608051 733 ntBASIC4.89□□□□□ -1.63
HMGA1P17096 AL049536.1-201ENST00000625043 744 ntBASIC4.89□□□□□ -1.63
HMGA1P17096 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.89□□□□□ -1.63
HMGA1P17096 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGA1P17096 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.89□□□□□ -1.63
HMGA1P17096 OR14L1P-202ENST00000641545 3009 ntBASIC4.89□□□□□ -1.63
HMGA1P17096 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HMGA1P17096 DDX18P5-201ENST00000534547 1306 ntBASIC4.89□□□□□ -1.63
HMGA1P17096 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGA1P17096 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGA1P17096 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.88□□□□□ -1.63
HMGA1P17096 CCAT2-201ENST00000630920 1752 ntBASIC4.88□□□□□ -1.63
HMGA1P17096 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMGA1P17096 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMGA1P17096 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.88□□□□□ -1.63
HMGA1P17096 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMGA1P17096 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMGA1P17096 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HMGA1P17096 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMGA1P17096 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.88□□□□□ -1.63
HMGA1P17096 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.88□□□□□ -1.63
HMGA1P17096 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
HMGA1P17096 FAM3C2-201ENST00000312214 681 ntBASIC4.88□□□□□ -1.63
HMGA1P17096 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.88□□□□□ -1.63
HMGA1P17096 RNA5SP447-201ENST00000363749 119 ntBASIC4.88□□□□□ -1.63
HMGA1P17096 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HMGA1P17096 AC068538.1-201ENST00000376856 336 ntBASIC4.88□□□□□ -1.63
HMGA1P17096 FABP12P1-201ENST00000401911 322 ntBASIC4.88□□□□□ -1.63
HMGA1P17096 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.88□□□□□ -1.63
HMGA1P17096 AC004690.1-201ENST00000418216 328 ntBASIC4.88□□□□□ -1.63
HMGA1P17096 E2F6P2-201ENST00000420708 748 ntBASIC4.88□□□□□ -1.63
HMGA1P17096 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms