Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AL158211.4-201ENST00000606988 584 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 AC072046.2-201ENST00000618366 268 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 SALL4P7-201ENST00000555779 3120 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 AC011416.1-201ENST00000514947 1732 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 MFSD8-217ENST00000641178 4374 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 DMD-202ENST00000343523 5623 ntTSL 5 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 ZNF833P-201ENST00000424938 1494 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 OR2M1P-201ENST00000318104 951 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 RNU1-150P-201ENST00000362491 162 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 snoZ40.1-201ENST00000364540 72 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 NACAP7-201ENST00000407371 609 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 SNX10-203ENST00000409367 746 ntTSL 5 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 SDHDP6-201ENST00000414693 480 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 NUP35P2-201ENST00000416748 943 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 MTCYBP38-201ENST00000417160 1123 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 MTND1P14-201ENST00000427400 950 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 AL353093.1-201ENST00000441292 436 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 TRIM60P16-201ENST00000444048 694 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 MTCO1P48-201ENST00000448024 1096 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 AC041039.1-201ENST00000485656 536 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 AP005639.2-201ENST00000527592 928 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 AC118273.2-201ENST00000532092 465 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 AC025260.1-201ENST00000548858 430 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 AL121579.1-201ENST00000555129 305 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 AC022404.1-201ENST00000555320 273 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 DUXAP1-201ENST00000556632 463 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 AL583832.1-201ENST00000603227 784 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 AL031281.1-201ENST00000604049 488 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 AC006924.1-201ENST00000610750 559 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 AC007342.8-201ENST00000623278 678 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 MROH3P-201ENST00000435735 2676 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 AC007114.2-201ENST00000576014 4281 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 AC009120.2-204ENST00000621548 2032 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 AL033543.1-201ENST00000623440 13454 ntBASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC8.22□□□□□ -1.09
CSB-PGBD3P0DP91 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CSB-PGBD3P0DP91 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC8.21□□□□□ -1.09
CSB-PGBD3P0DP91 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
CSB-PGBD3P0DP91 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC8.21□□□□□ -1.09
CSB-PGBD3P0DP91 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CSB-PGBD3P0DP91 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CSB-PGBD3P0DP91 AL021877.2-201ENST00000624442 10684 ntBASIC8.21□□□□□ -1.09
CSB-PGBD3P0DP91 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CSB-PGBD3P0DP91 CLCA3P-203ENST00000490028 2781 ntBASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 CUBNP3-201ENST00000457461 1784 ntBASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 ENSAP3-201ENST00000312710 333 ntBASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 MT-TH-201ENST00000387441 69 ntBASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 AL391361.1-201ENST00000405580 489 ntBASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 RN7SKP293-201ENST00000411389 296 ntBASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 AC245884.2-201ENST00000426257 404 ntBASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 AC241584.1-201ENST00000438469 1241 ntBASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC8.21□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms