Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FREM3P0C091 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
FREM3P0C091 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.34□□□□□ -1.71
FREM3P0C091 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.34□□□□□ -1.71
FREM3P0C091 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.34□□□□□ -1.71
FREM3P0C091 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
FREM3P0C091 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.34□□□□□ -1.71
FREM3P0C091 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FREM3P0C091 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FREM3P0C091 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
FREM3P0C091 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC4.34□□□□□ -1.71
FREM3P0C091 AC016831.4-201ENST00000438302 307 ntBASIC4.34□□□□□ -1.71
FREM3P0C091 AC012512.1-201ENST00000446594 718 ntBASIC4.34□□□□□ -1.71
FREM3P0C091 MORF4L2P1-201ENST00000503761 858 ntBASIC4.34□□□□□ -1.71
FREM3P0C091 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.34□□□□□ -1.71
FREM3P0C091 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.34□□□□□ -1.71
FREM3P0C091 AP000843.1-201ENST00000624880 701 ntBASIC4.34□□□□□ -1.71
FREM3P0C091 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
FREM3P0C091 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
FREM3P0C091 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
FREM3P0C091 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
FREM3P0C091 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
FREM3P0C091 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FREM3P0C091 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
FREM3P0C091 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
FREM3P0C091 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
FREM3P0C091 AC079741.1-201ENST00000321498 212 ntBASIC4.33□□□□□ -1.72
FREM3P0C091 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FREM3P0C091 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.33□□□□□ -1.72
FREM3P0C091 OR5M12P-201ENST00000423388 929 ntBASIC4.33□□□□□ -1.72
FREM3P0C091 AC091390.1-201ENST00000433904 331 ntBASIC4.33□□□□□ -1.72
FREM3P0C091 AC004980.3-201ENST00000447046 365 ntBASIC4.33□□□□□ -1.72
FREM3P0C091 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
FREM3P0C091 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.33□□□□□ -1.72
FREM3P0C091 AC073073.1-201ENST00000493920 463 ntBASIC4.33□□□□□ -1.72
FREM3P0C091 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.33□□□□□ -1.72
FREM3P0C091 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.33□□□□□ -1.72
FREM3P0C091 AC108043.1-201ENST00000512696 574 ntBASIC4.33□□□□□ -1.72
FREM3P0C091 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.33□□□□□ -1.72
FREM3P0C091 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.33□□□□□ -1.72
FREM3P0C091 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FREM3P0C091 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.33□□□□□ -1.72
FREM3P0C091 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.33□□□□□ -1.72
FREM3P0C091 MIR3667-201ENST00000581025 74 ntBASIC4.33□□□□□ -1.72
FREM3P0C091 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
FREM3P0C091 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.33□□□□□ -1.72
FREM3P0C091 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.33□□□□□ -1.72
FREM3P0C091 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
FREM3P0C091 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.33□□□□□ -1.72
FREM3P0C091 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
FREM3P0C091 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.33□□□□□ -1.72
FREM3P0C091 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.33□□□□□ -1.72
FREM3P0C091 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
FREM3P0C091 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
FREM3P0C091 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
FREM3P0C091 AC008549.2-201ENST00000333482 706 ntBASIC4.33□□□□□ -1.72
FREM3P0C091 NUDT19P3-201ENST00000404698 555 ntBASIC4.33□□□□□ -1.72
FREM3P0C091 RN7SKP267-201ENST00000410381 285 ntBASIC4.33□□□□□ -1.72
FREM3P0C091 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.33□□□□□ -1.72
FREM3P0C091 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FREM3P0C091 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.33□□□□□ -1.72
FREM3P0C091 RNA5SP103-201ENST00000459503 118 ntBASIC4.33□□□□□ -1.72
FREM3P0C091 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
FREM3P0C091 AC104763.1-201ENST00000475274 360 ntBASIC4.33□□□□□ -1.72
FREM3P0C091 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.33□□□□□ -1.72
FREM3P0C091 AC007016.1-201ENST00000512110 244 ntBASIC4.33□□□□□ -1.72
FREM3P0C091 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.33□□□□□ -1.72
FREM3P0C091 AC068993.1-201ENST00000546724 589 ntBASIC4.33□□□□□ -1.72
FREM3P0C091 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.33□□□□□ -1.72
FREM3P0C091 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.33□□□□□ -1.72
FREM3P0C091 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.33□□□□□ -1.72
FREM3P0C091 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.33□□□□□ -1.72
FREM3P0C091 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.33□□□□□ -1.72
FREM3P0C091 AL049794.2-201ENST00000616301 365 ntBASIC4.33□□□□□ -1.72
FREM3P0C091 AC138965.3-201ENST00000623875 498 ntBASIC4.33□□□□□ -1.72
FREM3P0C091 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
FREM3P0C091 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FREM3P0C091 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
FREM3P0C091 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
FREM3P0C091 RAB28P1-201ENST00000411517 641 ntBASIC4.32□□□□□ -1.72
FREM3P0C091 EIF4HP2-201ENST00000424380 563 ntBASIC4.32□□□□□ -1.72
FREM3P0C091 OR2AH1P-201ENST00000425717 928 ntBASIC4.32□□□□□ -1.72
FREM3P0C091 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.32□□□□□ -1.72
FREM3P0C091 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.32□□□□□ -1.72
FREM3P0C091 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
FREM3P0C091 GYG1P1-201ENST00000460864 698 ntBASIC4.32□□□□□ -1.72
FREM3P0C091 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.32□□□□□ -1.72
FREM3P0C091 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.32□□□□□ -1.72
FREM3P0C091 GSTP1P1-201ENST00000548078 319 ntBASIC4.32□□□□□ -1.72
FREM3P0C091 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.32□□□□□ -1.72
FREM3P0C091 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.32□□□□□ -1.72
FREM3P0C091 PCA3_2.1-201ENST00000612507 409 ntBASIC4.32□□□□□ -1.72
FREM3P0C091 AC114781.5-201ENST00000615297 108 ntBASIC4.32□□□□□ -1.72
FREM3P0C091 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FREM3P0C091 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
FREM3P0C091 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FREM3P0C091 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
FREM3P0C091 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
FREM3P0C091 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
FREM3P0C091 AC068287.1-201ENST00000430283 295 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms