Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 AC022022.1-201ENST00000430304 178 ntBASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 OR7E125P-201ENST00000443450 846 ntBASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 NDUFA5P8-201ENST00000449019 346 ntBASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 TCEA1P1-201ENST00000449716 880 ntBASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 SEPT7P6-201ENST00000469999 1143 ntBASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 RN7SL222P-201ENST00000476452 299 ntBASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 HMGB3P16-201ENST00000508037 287 ntBASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 RFPL4AP5-201ENST00000514977 504 ntBASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 SNORA11.6-201ENST00000619030 128 ntBASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 AC093591.2-201ENST00000565254 3843 ntBASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 AL022393.1-201ENST00000625142 1677 ntBASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 AC010132.2-201ENST00000295493 1043 ntBASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 SNURFL-201ENST00000309296 343 ntBASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 RNU4-7P-201ENST00000364758 141 ntBASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 QRSL1P2-201ENST00000418582 964 ntBASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 AC093084.1-201ENST00000424233 687 ntBASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 OR2AH1P-201ENST00000425717 928 ntBASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 CNOT7P2-201ENST00000441051 832 ntBASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 RN7SL799P-201ENST00000475891 298 ntBASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 HMGN2P25-201ENST00000486956 268 ntBASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 HIGD1AP14-201ENST00000507617 282 ntBASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 COX6B1P5-201ENST00000509843 249 ntBASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 ENPP7P9-201ENST00000514456 627 ntBASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 snoU109.6-201ENST00000516831 118 ntBASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 AC027308.1-201ENST00000517993 110 ntBASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 OR7E128P-201ENST00000532736 1024 ntBASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 AC005000.1-201ENST00000536192 288 ntBASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 AL049830.4-201ENST00000555149 351 ntBASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 AL356274.1-201ENST00000617064 410 ntBASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 AC021106.3-201ENST00000623925 531 ntBASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 TMEM30CP-203ENST00000637814 1035 ntBASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms