Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 NXF4-202ENST00000416098 1465 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 BMS1P13-201ENST00000417301 885 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 FABP7P1-201ENST00000424004 391 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 OTX2P1-201ENST00000450956 354 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 SETP20-201ENST00000457046 852 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 AC097484.1-201ENST00000471148 389 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 RPS4XP18-201ENST00000495480 763 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 AL136038.1-201ENST00000497246 351 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 AC090568.1-201ENST00000509499 856 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 COX6B1P5-201ENST00000509843 249 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 RNA5SP392-201ENST00000516905 112 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 RNU6-709P-201ENST00000517257 104 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 OR7E128P-201ENST00000532736 1024 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 TAS2R6P-201ENST00000605022 826 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 AC117490.2-201ENST00000610042 594 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 AL391597.1-201ENST00000618707 694 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 AC026124.2-201ENST00000621847 656 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 CR382285.2-201ENST00000624662 1495 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 AL359922.3-201ENST00000624779 1670 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 AC097461.1-201ENST00000568928 2821 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 AL445487.1-201ENST00000415694 1580 ntBASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 SNURFL-201ENST00000309296 343 ntBASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 RN7SKP162-201ENST00000363605 345 ntBASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 RAB5CP1-201ENST00000395972 580 ntBASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 RNA5SP296-201ENST00000410523 111 ntBASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 OR6C64P-201ENST00000419708 825 ntBASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 DDX39BP1-205ENST00000422507 192 ntBASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 RPL23AP37-201ENST00000479658 549 ntBASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 Y_RNA.719-201ENST00000517156 106 ntBASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 SETP1-201ENST00000556014 845 ntBASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 AC090888.3-201ENST00000558917 509 ntBASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 AC093249.4-201ENST00000564755 259 ntBASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 SNORA74C-1-201ENST00000580726 201 ntBASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 IMMP1LP3-201ENST00000604197 224 ntBASIC4.07□□□□□ -1.76
HDHD3Q9BSH5 AC234782.5-201ENST00000617723 324 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms