Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 CASC19-255ENST00000641733 1385 ntBASIC7.49□□□□□ -1.21
CFAP43Q8NDM7 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
CFAP43Q8NDM7 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
CFAP43Q8NDM7 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CFAP43Q8NDM7 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CFAP43Q8NDM7 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CFAP43Q8NDM7 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CFAP43Q8NDM7 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CFAP43Q8NDM7 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 AC025750.1-201ENST00000399891 379 ntBASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 AL591034.3-201ENST00000605511 685 ntBASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 AL049794.2-201ENST00000616301 365 ntBASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 SALL4P2-201ENST00000423288 2910 ntBASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 AL122126.1-201ENST00000546905 1318 ntBASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.48□□□□□ -1.21
CFAP43Q8NDM7 AC007738.1-201ENST00000413892 348 ntBASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 AP000843.1-201ENST00000624880 701 ntBASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 AC140134.1-201ENST00000511830 3544 ntBASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 RPL36AP36-201ENST00000418616 301 ntBASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 CYCSP24-201ENST00000445119 316 ntBASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 AC004980.3-201ENST00000447046 365 ntBASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 AC108463.1-201ENST00000450258 347 ntBASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 AC091868.1-201ENST00000508746 304 ntBASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 RNU1-6P-201ENST00000516290 144 ntBASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 PYM1-205ENST00000547925 499 ntTSL 3 BASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 AC022726.1-201ENST00000587475 207 ntBASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 AP001153.1-201ENST00000641024 338 ntBASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CFAP43Q8NDM7 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
CFAP43Q8NDM7 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC7.46□□□□□ -1.21
CFAP43Q8NDM7 MFSD8-242ENST00000641690 4199 ntBASIC7.46□□□□□ -1.21
CFAP43Q8NDM7 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
CFAP43Q8NDM7 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
CFAP43Q8NDM7 AC107068.1-201ENST00000563286 4218 ntBASIC7.46□□□□□ -1.21
CFAP43Q8NDM7 PCAT14-202ENST00000627127 3935 ntBASIC7.46□□□□□ -1.21
CFAP43Q8NDM7 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
CFAP43Q8NDM7 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CFAP43Q8NDM7 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.46□□□□□ -1.22
CFAP43Q8NDM7 CASKP1-201ENST00000412870 582 ntBASIC7.46□□□□□ -1.22
CFAP43Q8NDM7 AP001324.1-201ENST00000428553 399 ntBASIC7.46□□□□□ -1.22
CFAP43Q8NDM7 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC7.46□□□□□ -1.22
CFAP43Q8NDM7 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC7.46□□□□□ -1.22
CFAP43Q8NDM7 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC7.46□□□□□ -1.22
CFAP43Q8NDM7 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC7.46□□□□□ -1.22
CFAP43Q8NDM7 AC007497.1-201ENST00000610421 561 ntBASIC7.46□□□□□ -1.22
CFAP43Q8NDM7 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC7.46□□□□□ -1.22
CFAP43Q8NDM7 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CFAP43Q8NDM7 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC7.46□□□□□ -1.22
CFAP43Q8NDM7 AL592182.3-201ENST00000642132 3304 ntBASIC7.45□□□□□ -1.22
CFAP43Q8NDM7 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CFAP43Q8NDM7 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
CFAP43Q8NDM7 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
CFAP43Q8NDM7 SNORA70C-201ENST00000384538 135 ntBASIC7.45□□□□□ -1.22
CFAP43Q8NDM7 OR4C10P-201ENST00000434991 931 ntBASIC7.45□□□□□ -1.22
CFAP43Q8NDM7 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC7.45□□□□□ -1.22
CFAP43Q8NDM7 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC7.45□□□□□ -1.22
CFAP43Q8NDM7 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC7.45□□□□□ -1.22
CFAP43Q8NDM7 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms