Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL035458.1-201ENST00000433096 585 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 HMGB3P24-201ENST00000433260 622 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 AL591438.1-201ENST00000433508 581 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 AC090804.1-201ENST00000448870 490 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.9□□□□□ -1.63
SHFQ7M4L6 AC098826.2-201ENST00000452011 651 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SHFQ7M4L6 RPL5P22-201ENST00000480199 884 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SHFQ7M4L6 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.9□□□□□ -1.63
SHFQ7M4L6 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.9□□□□□ -1.63
SHFQ7M4L6 AC114781.3-201ENST00000512083 142 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 SNORA70.20-201ENST00000516848 126 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 AC091163.3-201ENST00000518269 1144 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SHFQ7M4L6 OR8G5-201ENST00000524943 1041 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SHFQ7M4L6 HMGB1P42-201ENST00000532126 553 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.9□□□□□ -1.63
SHFQ7M4L6 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.9□□□□□ -1.63
SHFQ7M4L6 AP003717.3-201ENST00000544832 1180 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.9□□□□□ -1.63
SHFQ7M4L6 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.9□□□□□ -1.63
SHFQ7M4L6 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.9□□□□□ -1.63
SHFQ7M4L6 IGBP1P1-201ENST00000554337 1009 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 OR11H3P-201ENST00000554547 982 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 AL049830.4-201ENST00000555149 351 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 AL049870.4-201ENST00000555741 486 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.9□□□□□ -1.63
SHFQ7M4L6 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.9□□□□□ -1.63
SHFQ7M4L6 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.9□□□□□ -1.63
SHFQ7M4L6 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.9□□□□□ -1.63
SHFQ7M4L6 AP002884.5-201ENST00000595053 1132 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.9□□□□□ -1.63
SHFQ7M4L6 RPP40P2-201ENST00000603596 712 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 AL139407.1-201ENST00000613826 1175 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 AC025574.2-201ENST00000615621 514 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 RN7SL544P-201ENST00000617232 284 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 AP004607.9-201ENST00000618202 316 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 RN7SL763P-201ENST00000620922 284 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 AC091932.2-201ENST00000623014 291 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 AC135068.5-201ENST00000624197 983 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.9□□□□□ -1.63
SHFQ7M4L6 AC083865.1-201ENST00000636634 831 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 AC073869.8-201ENST00000641806 335 ntBASIC4.9□□□□□ -1.63
SHFQ7M4L6 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.9□□□□□ -1.63
SHFQ7M4L6 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.9□□□□□ -1.63
SHFQ7M4L6 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
SHFQ7M4L6 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.9□□□□□ -1.63
SHFQ7M4L6 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.9□□□□□ -1.63
SHFQ7M4L6 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.9□□□□□ -1.63
SHFQ7M4L6 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.63
SHFQ7M4L6 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHFQ7M4L6 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHFQ7M4L6 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHFQ7M4L6 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHFQ7M4L6 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHFQ7M4L6 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 SNORA48.4-201ENST00000391089 134 ntBASIC4.89□□□□□ -1.63
SHFQ7M4L6 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 RPS3AP2-201ENST00000407190 754 ntBASIC4.89□□□□□ -1.63
SHFQ7M4L6 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHFQ7M4L6 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 GAPDHP34-201ENST00000432112 823 ntBASIC4.89□□□□□ -1.63
SHFQ7M4L6 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 AC000041.1-201ENST00000439655 175 ntBASIC4.89□□□□□ -1.63
SHFQ7M4L6 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.89□□□□□ -1.63
SHFQ7M4L6 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 AL096803.2-201ENST00000450032 677 ntBASIC4.89□□□□□ -1.63
SHFQ7M4L6 AC104339.1-201ENST00000465478 348 ntBASIC4.89□□□□□ -1.63
SHFQ7M4L6 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHFQ7M4L6 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 MYL12BP2-201ENST00000503948 512 ntBASIC4.89□□□□□ -1.63
SHFQ7M4L6 HPRT1P1-201ENST00000509498 657 ntBASIC4.89□□□□□ -1.63
SHFQ7M4L6 IMPA1P1-201ENST00000510718 842 ntBASIC4.89□□□□□ -1.63
SHFQ7M4L6 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHFQ7M4L6 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.89□□□□□ -1.63
SHFQ7M4L6 RN7SKP183-201ENST00000517169 324 ntBASIC4.89□□□□□ -1.63
SHFQ7M4L6 AC011853.1-201ENST00000518911 454 ntBASIC4.89□□□□□ -1.63
SHFQ7M4L6 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 CYB5AP5-201ENST00000549779 389 ntBASIC4.89□□□□□ -1.63
SHFQ7M4L6 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 SETP1-201ENST00000556014 845 ntBASIC4.89□□□□□ -1.63
SHFQ7M4L6 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.89□□□□□ -1.63
SHFQ7M4L6 MIR744-201ENST00000578242 98 ntBASIC4.89□□□□□ -1.63
SHFQ7M4L6 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms