Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AL671862.1-201ENST00000515851 349 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AC068993.1-201ENST00000546724 589 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AC135178.6-201ENST00000605314 398 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AP000894.4-201ENST00000610185 483 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AC116447.1-201ENST00000613153 453 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 uc_338.9-201ENST00000617424 182 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 MIR6729-201ENST00000618194 65 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AC139769.3-201ENST00000618383 175 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 SAMMSON-227ENST00000642114 1199 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AL022322.2-201ENST00000624072 20397 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 CASC19-248ENST00000641674 1356 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 AL731532.2-201ENST00000623542 1953 ntBASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 OR9K1P-201ENST00000326513 941 ntBASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 RNA5SP242-201ENST00000364171 118 ntBASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 RNA5SP339-201ENST00000390987 122 ntBASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 HMGB1P13-201ENST00000406019 642 ntBASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 RNU2-17P-201ENST00000410290 190 ntBASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 RNA5SP178-201ENST00000410380 128 ntBASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 UBE2V1P11-201ENST00000411559 285 ntBASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 CHEK2P5-201ENST00000423877 246 ntBASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 RPL23AP23-201ENST00000452590 471 ntBASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 SETP20-201ENST00000457046 852 ntBASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 RPL7P48-201ENST00000461513 746 ntBASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 RN7SL547P-201ENST00000490793 290 ntBASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 RPS12P31-201ENST00000491419 398 ntBASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 RPS24P16-201ENST00000497294 392 ntBASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 AC098976.1-201ENST00000513014 541 ntBASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 CDC42P3-201ENST00000518493 633 ntBASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 AC004923.2-201ENST00000529649 369 ntBASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 NMNAT1P5-201ENST00000559657 841 ntBASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 AC005341.1-201ENST00000571086 708 ntBASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 RBM22P1-201ENST00000578589 1214 ntBASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 MIR548Y-201ENST00000582739 110 ntBASIC4.76□□□□□ -1.65
NHLRC1Q6VVB1 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms