Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 PTP4A1P3-201ENST00000433661 420 ntBASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 CYCSP11-201ENST00000436426 315 ntBASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 AC004815.1-201ENST00000484185 331 ntBASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 COX6B1P2-201ENST00000489624 230 ntBASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 ENPP7P11-201ENST00000505915 627 ntBASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 SNORA76.2-201ENST00000517095 137 ntBASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 CBX3P2-202ENST00000583365 535 ntBASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 AC211433.2-201ENST00000608433 387 ntBASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 THAP12P5-201ENST00000405864 2275 ntBASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.59□□□□□ -1.51
SNX30Q5VWJ9 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SNX30Q5VWJ9 AC011493.1-201ENST00000596753 1632 ntBASIC5.59□□□□□ -1.52
SNX30Q5VWJ9 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.59□□□□□ -1.52
SNX30Q5VWJ9 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 ADAM5-202ENST00000399789 1942 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 AC100757.1-201ENST00000616872 1835 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 U8.4-201ENST00000363626 134 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 RNU4-31P-201ENST00000384211 141 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 SNORA40.4-201ENST00000390971 128 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 TAF9BP2-201ENST00000400856 499 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 RNA5SP498-201ENST00000411342 120 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 AC002524.1-201ENST00000411687 547 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 NDUFB4P8-201ENST00000435351 367 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 AC096741.1-201ENST00000472250 846 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 SYT14P1-201ENST00000481459 721 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 RPL7P40-201ENST00000481703 745 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 AC058823.1-201ENST00000485315 474 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 RN7SL423P-201ENST00000486202 304 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 RPL23AP73-201ENST00000492507 471 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 IMPA1P1-201ENST00000510718 842 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 AC027338.1-201ENST00000514840 825 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 AC018442.3-201ENST00000523025 183 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 AC079064.1-201ENST00000528365 362 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 CD24P2-201ENST00000565486 219 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 AC106730.2-201ENST00000566641 540 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 AL121612.2-201ENST00000612261 482 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 MIR7155-201ENST00000615925 56 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 MIR1264-201ENST00000616374 69 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 AP003400.3-201ENST00000624904 346 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 AC097372.4-201ENST00000625025 466 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 CYP4F35P-202ENST00000636121 390 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 ZNF90P1-201ENST00000480493 1951 ntBASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNX30Q5VWJ9 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.57□□□□□ -1.52
SNX30Q5VWJ9 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.57□□□□□ -1.52
SNX30Q5VWJ9 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX30Q5VWJ9 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SNX30Q5VWJ9 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNX30Q5VWJ9 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNX30Q5VWJ9 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.57□□□□□ -1.52
SNX30Q5VWJ9 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX30Q5VWJ9 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms