Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
AP1S2P56377 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
AP1S2P56377 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
AP1S2P56377 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S2P56377 CR788268.1-201ENST00000603931 1809 ntBASIC4.81□□□□□ -1.64
AP1S2P56377 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
AP1S2P56377 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S2P56377 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S2P56377 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S2P56377 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
AP1S2P56377 RNU1-106P-201ENST00000384382 164 ntBASIC4.81□□□□□ -1.64
AP1S2P56377 MIR765-201ENST00000390226 114 ntBASIC4.81□□□□□ -1.64
AP1S2P56377 AP002530.1-201ENST00000405705 684 ntBASIC4.81□□□□□ -1.64
AP1S2P56377 TMBIM7P-201ENST00000418074 855 ntBASIC4.81□□□□□ -1.64
AP1S2P56377 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.81□□□□□ -1.64
AP1S2P56377 SCAND3P1-201ENST00000439854 1060 ntBASIC4.81□□□□□ -1.64
AP1S2P56377 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.81□□□□□ -1.64
AP1S2P56377 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.81□□□□□ -1.64
AP1S2P56377 MYO5BP2-201ENST00000449815 1277 ntBASIC4.81□□□□□ -1.64
AP1S2P56377 OR2AF1P-201ENST00000454899 889 ntBASIC4.81□□□□□ -1.64
AP1S2P56377 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.81□□□□□ -1.64
AP1S2P56377 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.81□□□□□ -1.64
AP1S2P56377 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.81□□□□□ -1.64
AP1S2P56377 RN7SL319P-201ENST00000480656 221 ntBASIC4.81□□□□□ -1.64
AP1S2P56377 RN7SL629P-201ENST00000489622 285 ntBASIC4.81□□□□□ -1.64
AP1S2P56377 ARL4AP1-201ENST00000503220 705 ntBASIC4.81□□□□□ -1.64
AP1S2P56377 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.81□□□□□ -1.64
AP1S2P56377 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.81□□□□□ -1.64
AP1S2P56377 HNRNPRP2-201ENST00000528421 743 ntBASIC4.81□□□□□ -1.64
AP1S2P56377 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.81□□□□□ -1.64
AP1S2P56377 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.81□□□□□ -1.64
AP1S2P56377 AC037198.3-201ENST00000616754 526 ntBASIC4.81□□□□□ -1.64
AP1S2P56377 AC087821.1-201ENST00000623639 567 ntBASIC4.81□□□□□ -1.64
AP1S2P56377 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.81□□□□□ -1.64
AP1S2P56377 DDX18P6-201ENST00000450119 1997 ntBASIC4.81□□□□□ -1.64
AP1S2P56377 OR14L1P-202ENST00000641545 3009 ntBASIC4.81□□□□□ -1.64
AP1S2P56377 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S2P56377 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.81□□□□□ -1.64
AP1S2P56377 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S2P56377 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S2P56377 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.8□□□□□ -1.64
AP1S2P56377 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S2P56377 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S2P56377 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S2P56377 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
AP1S2P56377 RNA5SP305-201ENST00000362665 119 ntBASIC4.8□□□□□ -1.64
AP1S2P56377 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S2P56377 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.8□□□□□ -1.64
AP1S2P56377 RNU4-34P-201ENST00000410431 124 ntBASIC4.8□□□□□ -1.64
AP1S2P56377 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.8□□□□□ -1.64
AP1S2P56377 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.8□□□□□ -1.64
AP1S2P56377 AF186996.5-201ENST00000418098 904 ntBASIC4.8□□□□□ -1.64
AP1S2P56377 AC073850.1-201ENST00000449243 255 ntBASIC4.8□□□□□ -1.64
AP1S2P56377 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.8□□□□□ -1.64
AP1S2P56377 RPL7AP10-201ENST00000481016 791 ntBASIC4.8□□□□□ -1.64
AP1S2P56377 AC116562.1-201ENST00000485355 781 ntBASIC4.8□□□□□ -1.64
AP1S2P56377 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.8□□□□□ -1.64
AP1S2P56377 AC093763.2-201ENST00000505334 1223 ntBASIC4.8□□□□□ -1.64
AP1S2P56377 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.8□□□□□ -1.64
AP1S2P56377 RNA5SP464-201ENST00000516251 108 ntBASIC4.8□□□□□ -1.64
AP1S2P56377 RN7SKP147-201ENST00000517154 244 ntBASIC4.8□□□□□ -1.64
AP1S2P56377 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.8□□□□□ -1.64
AP1S2P56377 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.8□□□□□ -1.64
AP1S2P56377 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.8□□□□□ -1.64
AP1S2P56377 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S2P56377 MIR3691-201ENST00000578066 90 ntBASIC4.8□□□□□ -1.64
AP1S2P56377 RN7SL753P-201ENST00000581238 290 ntBASIC4.8□□□□□ -1.64
AP1S2P56377 AC124856.1-201ENST00000600819 896 ntBASIC4.8□□□□□ -1.64
AP1S2P56377 MEMO1P5-201ENST00000604810 406 ntBASIC4.8□□□□□ -1.64
AP1S2P56377 EIF3FP1-201ENST00000613970 806 ntBASIC4.8□□□□□ -1.64
AP1S2P56377 AP002799.1-201ENST00000623552 423 ntBASIC4.8□□□□□ -1.64
AP1S2P56377 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.8□□□□□ -1.64
AP1S2P56377 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.8□□□□□ -1.64
AP1S2P56377 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S2P56377 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S2P56377 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP1S2P56377 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
AP1S2P56377 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
AP1S2P56377 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP1S2P56377 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP1S2P56377 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP1S2P56377 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
AP1S2P56377 CHMP1B2P-201ENST00000399581 597 ntBASIC4.79□□□□□ -1.64
AP1S2P56377 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.79□□□□□ -1.64
AP1S2P56377 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.79□□□□□ -1.64
AP1S2P56377 RN7SKP213-201ENST00000410746 298 ntBASIC4.79□□□□□ -1.64
AP1S2P56377 GJA6P-201ENST00000415117 1042 ntBASIC4.79□□□□□ -1.64
AP1S2P56377 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.79□□□□□ -1.64
AP1S2P56377 RHOT1P3-201ENST00000436571 331 ntBASIC4.79□□□□□ -1.64
AP1S2P56377 AC092647.3-201ENST00000443044 633 ntBASIC4.79□□□□□ -1.64
AP1S2P56377 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.79□□□□□ -1.64
AP1S2P56377 AC140172.1-201ENST00000502928 141 ntBASIC4.79□□□□□ -1.64
AP1S2P56377 AC113430.1-201ENST00000506872 718 ntBASIC4.79□□□□□ -1.64
AP1S2P56377 HMGB3P16-201ENST00000508037 287 ntBASIC4.79□□□□□ -1.64
AP1S2P56377 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.79□□□□□ -1.64
AP1S2P56377 RNA5SP249-201ENST00000516127 99 ntBASIC4.79□□□□□ -1.64
AP1S2P56377 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.79□□□□□ -1.64
AP1S2P56377 AC026688.1-201ENST00000520639 1168 ntBASIC4.79□□□□□ -1.64
AP1S2P56377 AC005868.1-201ENST00000536421 331 ntBASIC4.79□□□□□ -1.64
AP1S2P56377 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms