Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.98□□□□□ -1.61
SOX2P48431 DNAJA1P5-201ENST00000440278 943 ntBASIC4.98□□□□□ -1.61
SOX2P48431 AC002542.1-201ENST00000440683 193 ntBASIC4.98□□□□□ -1.61
SOX2P48431 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.98□□□□□ -1.61
SOX2P48431 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.98□□□□□ -1.61
SOX2P48431 RBMY2TP-201ENST00000451162 947 ntBASIC4.98□□□□□ -1.61
SOX2P48431 AC093166.4-201ENST00000457867 318 ntBASIC4.98□□□□□ -1.61
SOX2P48431 RNU7-140P-201ENST00000459546 60 ntBASIC4.98□□□□□ -1.61
SOX2P48431 RPS23P2-201ENST00000463671 415 ntBASIC4.98□□□□□ -1.61
SOX2P48431 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.98□□□□□ -1.61
SOX2P48431 PSAT1P4-201ENST00000466500 526 ntBASIC4.98□□□□□ -1.61
SOX2P48431 AC092865.4-201ENST00000477936 615 ntBASIC4.98□□□□□ -1.61
SOX2P48431 AC099521.1-201ENST00000482557 334 ntBASIC4.98□□□□□ -1.61
SOX2P48431 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.98□□□□□ -1.61
SOX2P48431 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.98□□□□□ -1.61
SOX2P48431 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.98□□□□□ -1.61
SOX2P48431 AC091951.3-201ENST00000504093 246 ntBASIC4.98□□□□□ -1.61
SOX2P48431 HPRT1P2-201ENST00000505250 544 ntBASIC4.98□□□□□ -1.61
SOX2P48431 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.98□□□□□ -1.61
SOX2P48431 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.98□□□□□ -1.61
SOX2P48431 PRELID3BP4-201ENST00000515476 571 ntBASIC4.98□□□□□ -1.61
SOX2P48431 Y_RNA.688-201ENST00000516565 95 ntBASIC4.98□□□□□ -1.61
SOX2P48431 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.98□□□□□ -1.61
SOX2P48431 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.98□□□□□ -1.61
SOX2P48431 OR4A2P-201ENST00000527276 913 ntBASIC4.98□□□□□ -1.61
SOX2P48431 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.98□□□□□ -1.61
SOX2P48431 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.98□□□□□ -1.61
SOX2P48431 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.98□□□□□ -1.61
SOX2P48431 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.98□□□□□ -1.61
SOX2P48431 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.98□□□□□ -1.61
SOX2P48431 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.98□□□□□ -1.61
SOX2P48431 AL078601.3-201ENST00000573303 535 ntBASIC4.98□□□□□ -1.61
SOX2P48431 CCDC58P1-201ENST00000578567 430 ntBASIC4.98□□□□□ -1.61
SOX2P48431 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.98□□□□□ -1.61
SOX2P48431 SS18L2P2-201ENST00000583960 235 ntBASIC4.98□□□□□ -1.61
SOX2P48431 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
SOX2P48431 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC4.98□□□□□ -1.61
SOX2P48431 AC040904.1-201ENST00000590850 223 ntBASIC4.98□□□□□ -1.61
SOX2P48431 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.98□□□□□ -1.61
SOX2P48431 AC010503.3-201ENST00000594355 540 ntBASIC4.98□□□□□ -1.61
SOX2P48431 ZNF92P3-201ENST00000596594 954 ntBASIC4.98□□□□□ -1.61
SOX2P48431 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.98□□□□□ -1.61
SOX2P48431 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC4.98□□□□□ -1.61
SOX2P48431 AC024257.5-201ENST00000612739 531 ntBASIC4.98□□□□□ -1.61
SOX2P48431 VN1R74P-201ENST00000613259 503 ntBASIC4.98□□□□□ -1.61
SOX2P48431 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SOX2P48431 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.98□□□□□ -1.61
SOX2P48431 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SOX2P48431 AC007342.8-201ENST00000623278 678 ntBASIC4.98□□□□□ -1.61
SOX2P48431 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SOX2P48431 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SOX2P48431 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SOX2P48431 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SOX2P48431 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SOX2P48431 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SOX2P48431 AC144833.1-201ENST00000567953 4089 ntBASIC4.98□□□□□ -1.61
SOX2P48431 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SOX2P48431 AL121950.1-201ENST00000624993 2077 ntBASIC4.98□□□□□ -1.61
SOX2P48431 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
SOX2P48431 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SOX2P48431 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SOX2P48431 AP005432.1-201ENST00000580891 3485 ntBASIC4.98□□□□□ -1.61
SOX2P48431 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.97□□□□□ -1.61
SOX2P48431 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SOX2P48431 AC003973.3-201ENST00000624863 2822 ntBASIC4.97□□□□□ -1.61
SOX2P48431 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SOX2P48431 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.97□□□□□ -1.61
SOX2P48431 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.97□□□□□ -1.61
SOX2P48431 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SOX2P48431 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.97□□□□□ -1.61
SOX2P48431 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
SOX2P48431 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SOX2P48431 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.97□□□□□ -1.61
SOX2P48431 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SOX2P48431 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
SOX2P48431 AC092681.1-201ENST00000297369 291 ntBASIC4.97□□□□□ -1.61
SOX2P48431 RNU6-249P-201ENST00000363016 102 ntBASIC4.97□□□□□ -1.61
SOX2P48431 RNU1-87P-201ENST00000363727 170 ntBASIC4.97□□□□□ -1.61
SOX2P48431 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
SOX2P48431 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.97□□□□□ -1.61
SOX2P48431 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.97□□□□□ -1.61
SOX2P48431 RNA5SP198-201ENST00000410376 127 ntBASIC4.97□□□□□ -1.61
SOX2P48431 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.97□□□□□ -1.61
SOX2P48431 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.97□□□□□ -1.61
SOX2P48431 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.97□□□□□ -1.61
SOX2P48431 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.97□□□□□ -1.61
SOX2P48431 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.97□□□□□ -1.61
SOX2P48431 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.97□□□□□ -1.61
SOX2P48431 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.97□□□□□ -1.61
SOX2P48431 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.97□□□□□ -1.61
SOX2P48431 AC099782.1-201ENST00000425889 474 ntBASIC4.97□□□□□ -1.61
SOX2P48431 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.97□□□□□ -1.61
SOX2P48431 GAPDHP48-201ENST00000436626 961 ntBASIC4.97□□□□□ -1.61
SOX2P48431 RPL12P49-201ENST00000441100 121 ntBASIC4.97□□□□□ -1.61
SOX2P48431 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.97□□□□□ -1.61
SOX2P48431 KATNBL1P3-201ENST00000443475 909 ntBASIC4.97□□□□□ -1.61
SOX2P48431 LINC02210-201ENST00000444561 288 ntBASIC4.97□□□□□ -1.61
SOX2P48431 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC4.97□□□□□ -1.61
SOX2P48431 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.97□□□□□ -1.61
SOX2P48431 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms