Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CLIP1P30622 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
CLIP1P30622 AL137100.1-201ENST00000556703 1620 ntBASIC7.55□□□□□ -1.2
CLIP1P30622 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CLIP1P30622 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CLIP1P30622 AC008549.2-201ENST00000333482 706 ntBASIC7.55□□□□□ -1.2
CLIP1P30622 AL590762.2-201ENST00000395798 571 ntBASIC7.55□□□□□ -1.2
CLIP1P30622 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC7.55□□□□□ -1.2
CLIP1P30622 AC004690.1-201ENST00000418216 328 ntBASIC7.55□□□□□ -1.2
CLIP1P30622 CHIAP3-201ENST00000423668 1133 ntBASIC7.55□□□□□ -1.2
CLIP1P30622 TRIM60P9Y-201ENST00000438459 816 ntBASIC7.55□□□□□ -1.2
CLIP1P30622 TRIM60P11Y-201ENST00000445313 801 ntBASIC7.55□□□□□ -1.2
CLIP1P30622 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC7.55□□□□□ -1.2
CLIP1P30622 NELL2-211ENST00000548826 559 ntTSL 2 BASIC7.55□□□□□ -1.2
CLIP1P30622 CYCSP40-201ENST00000575927 294 ntBASIC7.55□□□□□ -1.2
CLIP1P30622 AC006338.2-201ENST00000616864 791 ntBASIC7.55□□□□□ -1.2
CLIP1P30622 AC125257.1-201ENST00000560400 2930 ntBASIC7.55□□□□□ -1.2
CLIP1P30622 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
CLIP1P30622 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CLIP1P30622 AL121950.1-201ENST00000624993 2077 ntBASIC7.55□□□□□ -1.2
CLIP1P30622 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
CLIP1P30622 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CLIP1P30622 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CLIP1P30622 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
CLIP1P30622 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC7.55□□□□□ -1.2
CLIP1P30622 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CLIP1P30622 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CLIP1P30622 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
CLIP1P30622 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CLIP1P30622 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CLIP1P30622 SNORD113.2-201ENST00000364166 89 ntBASIC7.54□□□□□ -1.2
CLIP1P30622 AL591848.1-201ENST00000413092 322 ntBASIC7.54□□□□□ -1.2
CLIP1P30622 MRPS21P2-201ENST00000424704 264 ntBASIC7.54□□□□□ -1.2
CLIP1P30622 CKS1BP6-201ENST00000424932 240 ntBASIC7.54□□□□□ -1.2
CLIP1P30622 AL136455.1-201ENST00000441083 1240 ntBASIC7.54□□□□□ -1.2
CLIP1P30622 RHEBP2-201ENST00000450289 600 ntBASIC7.54□□□□□ -1.2
CLIP1P30622 AC025164.1-201ENST00000496249 478 ntBASIC7.54□□□□□ -1.2
CLIP1P30622 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC7.54□□□□□ -1.2
CLIP1P30622 TOMM20P2-201ENST00000540082 421 ntBASIC7.54□□□□□ -1.2
CLIP1P30622 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC7.54□□□□□ -1.2
CLIP1P30622 FKBP1BP1-201ENST00000553366 325 ntBASIC7.54□□□□□ -1.2
CLIP1P30622 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC7.54□□□□□ -1.2
CLIP1P30622 AC068831.8-201ENST00000620171 435 ntBASIC7.54□□□□□ -1.2
CLIP1P30622 AL034370.1-201ENST00000397254 1590 ntBASIC7.54□□□□□ -1.2
CLIP1P30622 CCAT2-201ENST00000630920 1752 ntBASIC7.54□□□□□ -1.2
CLIP1P30622 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
CLIP1P30622 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CLIP1P30622 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CLIP1P30622 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
CLIP1P30622 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
CLIP1P30622 DHX9P1-201ENST00000436565 3076 ntBASIC7.53□□□□□ -1.2
CLIP1P30622 RNU4-25P-201ENST00000410569 230 ntBASIC7.53□□□□□ -1.2
CLIP1P30622 TMBIM7P-201ENST00000418074 855 ntBASIC7.53□□□□□ -1.2
CLIP1P30622 CENPIP1-201ENST00000425713 902 ntBASIC7.53□□□□□ -1.2
CLIP1P30622 RSL24D1P6-201ENST00000426934 401 ntBASIC7.53□□□□□ -1.2
CLIP1P30622 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC7.53□□□□□ -1.2
CLIP1P30622 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC7.53□□□□□ -1.2
CLIP1P30622 MTND4LP2-201ENST00000502312 285 ntBASIC7.53□□□□□ -1.2
CLIP1P30622 AP002981.1-201ENST00000517692 975 ntBASIC7.53□□□□□ -1.2
CLIP1P30622 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC7.53□□□□□ -1.2
CLIP1P30622 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC7.53□□□□□ -1.2
CLIP1P30622 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC7.53□□□□□ -1.2
CLIP1P30622 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC7.53□□□□□ -1.2
CLIP1P30622 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CLIP1P30622 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CLIP1P30622 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CLIP1P30622 AC018628.1-201ENST00000624147 3819 ntBASIC7.53□□□□□ -1.2
CLIP1P30622 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC7.53□□□□□ -1.2
CLIP1P30622 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CLIP1P30622 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
CLIP1P30622 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
CLIP1P30622 RPS21P8-201ENST00000413365 247 ntBASIC7.52□□□□□ -1.2
CLIP1P30622 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC7.52□□□□□ -1.2
CLIP1P30622 NDUFAF4P3-201ENST00000456468 525 ntBASIC7.52□□□□□ -1.2
CLIP1P30622 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
CLIP1P30622 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC7.52□□□□□ -1.2
CLIP1P30622 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC7.52□□□□□ -1.2
CLIP1P30622 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC7.52□□□□□ -1.2
CLIP1P30622 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC7.52□□□□□ -1.2
CLIP1P30622 RPL12P25-202ENST00000598100 674 ntBASIC7.52□□□□□ -1.2
CLIP1P30622 AC073137.1-201ENST00000605636 634 ntBASIC7.52□□□□□ -1.2
CLIP1P30622 AL445423.1-201ENST00000609941 536 ntBASIC7.52□□□□□ -1.2
CLIP1P30622 AC004232.3-201ENST00000622977 525 ntBASIC7.52□□□□□ -1.2
CLIP1P30622 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC7.52□□□□□ -1.2
CLIP1P30622 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.2
CLIP1P30622 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
CLIP1P30622 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CLIP1P30622 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CLIP1P30622 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CLIP1P30622 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC7.52□□□□□ -1.21
CLIP1P30622 AC025574.1-201ENST00000554784 1653 ntBASIC7.52□□□□□ -1.21
CLIP1P30622 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC7.52□□□□□ -1.21
CLIP1P30622 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CLIP1P30622 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CLIP1P30622 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CLIP1P30622 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC7.52□□□□□ -1.21
CLIP1P30622 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC7.52□□□□□ -1.21
CLIP1P30622 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC7.52□□□□□ -1.21
CLIP1P30622 AL606490.8-201ENST00000441624 319 ntBASIC7.52□□□□□ -1.21
CLIP1P30622 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms