Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
SSX4O60224 AL121886.1-201ENST00000358609 435 ntBASIC4.9□□□□□ -1.63
SSX4O60224 MIR16-2-201ENST00000362117 81 ntBASIC4.9□□□□□ -1.63
SSX4O60224 MIR105-2-201ENST00000385083 81 ntBASIC4.9□□□□□ -1.63
SSX4O60224 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.9□□□□□ -1.63
SSX4O60224 RNU2-17P-201ENST00000410290 190 ntBASIC4.9□□□□□ -1.63
SSX4O60224 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.9□□□□□ -1.63
SSX4O60224 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.9□□□□□ -1.63
SSX4O60224 XKRYP4-201ENST00000414395 483 ntBASIC4.9□□□□□ -1.63
SSX4O60224 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.9□□□□□ -1.63
SSX4O60224 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SSX4O60224 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.9□□□□□ -1.63
SSX4O60224 AC022022.1-201ENST00000430304 178 ntBASIC4.9□□□□□ -1.63
SSX4O60224 AL512637.2-201ENST00000431287 1256 ntBASIC4.9□□□□□ -1.63
SSX4O60224 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SSX4O60224 XKRYP5-201ENST00000449659 483 ntBASIC4.9□□□□□ -1.63
SSX4O60224 AP000547.1-201ENST00000454360 617 ntBASIC4.9□□□□□ -1.63
SSX4O60224 OR2AO1P-201ENST00000476497 403 ntBASIC4.9□□□□□ -1.63
SSX4O60224 RN7SL184P-201ENST00000488308 297 ntBASIC4.9□□□□□ -1.63
SSX4O60224 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.9□□□□□ -1.63
SSX4O60224 AC025459.1-201ENST00000504072 156 ntBASIC4.9□□□□□ -1.63
SSX4O60224 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.9□□□□□ -1.63
SSX4O60224 RNA5SP34-201ENST00000516887 130 ntBASIC4.9□□□□□ -1.63
SSX4O60224 AC018442.3-201ENST00000523025 183 ntBASIC4.9□□□□□ -1.63
SSX4O60224 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.9□□□□□ -1.63
SSX4O60224 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.9□□□□□ -1.63
SSX4O60224 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.9□□□□□ -1.63
SSX4O60224 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.9□□□□□ -1.63
SSX4O60224 AC027369.5-201ENST00000533838 755 ntBASIC4.9□□□□□ -1.63
SSX4O60224 AC006518.1-201ENST00000541449 943 ntBASIC4.9□□□□□ -1.63
SSX4O60224 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.9□□□□□ -1.63
SSX4O60224 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.9□□□□□ -1.63
SSX4O60224 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.9□□□□□ -1.63
SSX4O60224 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SSX4O60224 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.9□□□□□ -1.63
SSX4O60224 AC122134.1-201ENST00000565664 1104 ntBASIC4.9□□□□□ -1.63
SSX4O60224 MIR1269B-201ENST00000580405 75 ntBASIC4.9□□□□□ -1.63
SSX4O60224 MIR7853-201ENST00000584820 132 ntBASIC4.9□□□□□ -1.63
SSX4O60224 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.9□□□□□ -1.63
SSX4O60224 AC144521.1-201ENST00000607148 956 ntBASIC4.9□□□□□ -1.63
SSX4O60224 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.9□□□□□ -1.63
SSX4O60224 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.9□□□□□ -1.63
SSX4O60224 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
SSX4O60224 AC119674.1-212ENST00000641155 993 ntBASIC4.9□□□□□ -1.63
SSX4O60224 SRRM1P3-201ENST00000426911 2678 ntBASIC4.9□□□□□ -1.63
SSX4O60224 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSX4O60224 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSX4O60224 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SSX4O60224 VPS35P1-201ENST00000563400 1518 ntBASIC4.9□□□□□ -1.63
SSX4O60224 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.9□□□□□ -1.63
SSX4O60224 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSX4O60224 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.9□□□□□ -1.63
SSX4O60224 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSX4O60224 SOCS5P3-201ENST00000425115 1576 ntBASIC4.9□□□□□ -1.63
SSX4O60224 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SSX4O60224 OR55B1P-203ENST00000641518 2602 ntBASIC4.9□□□□□ -1.63
SSX4O60224 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSX4O60224 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSX4O60224 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSX4O60224 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.89□□□□□ -1.63
SSX4O60224 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
SSX4O60224 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
SSX4O60224 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SSX4O60224 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.89□□□□□ -1.63
SSX4O60224 OR4K17-201ENST00000315543 1032 ntBASIC4.89□□□□□ -1.63
SSX4O60224 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SSX4O60224 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SSX4O60224 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.89□□□□□ -1.63
SSX4O60224 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SSX4O60224 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSX4O60224 RNU6-532P-201ENST00000384318 107 ntBASIC4.89□□□□□ -1.63
SSX4O60224 HMGB1P10-201ENST00000395823 563 ntBASIC4.89□□□□□ -1.63
SSX4O60224 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.89□□□□□ -1.63
SSX4O60224 AC010385.1-201ENST00000412374 256 ntBASIC4.89□□□□□ -1.63
SSX4O60224 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.89□□□□□ -1.63
SSX4O60224 COX5BP7-201ENST00000414780 274 ntBASIC4.89□□□□□ -1.63
SSX4O60224 AL596448.1-201ENST00000415024 392 ntBASIC4.89□□□□□ -1.63
SSX4O60224 AL158050.1-201ENST00000416077 457 ntBASIC4.89□□□□□ -1.63
SSX4O60224 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.89□□□□□ -1.63
SSX4O60224 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSX4O60224 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.89□□□□□ -1.63
SSX4O60224 AL606495.1-201ENST00000422100 813 ntBASIC4.89□□□□□ -1.63
SSX4O60224 VN1R42P-201ENST00000424651 344 ntBASIC4.89□□□□□ -1.63
SSX4O60224 NANOGP4-201ENST00000427230 913 ntBASIC4.89□□□□□ -1.63
SSX4O60224 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.89□□□□□ -1.63
SSX4O60224 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.89□□□□□ -1.63
SSX4O60224 RPL34P6-201ENST00000432390 345 ntBASIC4.89□□□□□ -1.63
SSX4O60224 CFL1P1-202ENST00000432948 411 ntBASIC4.89□□□□□ -1.63
SSX4O60224 CLUHP1-201ENST00000435012 1190 ntBASIC4.89□□□□□ -1.63
SSX4O60224 AL627308.1-201ENST00000435693 821 ntBASIC4.89□□□□□ -1.63
SSX4O60224 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.89□□□□□ -1.63
SSX4O60224 AC012075.1-201ENST00000436549 580 ntBASIC4.89□□□□□ -1.63
SSX4O60224 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.89□□□□□ -1.63
SSX4O60224 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.89□□□□□ -1.63
SSX4O60224 AC073465.2-201ENST00000440938 498 ntBASIC4.89□□□□□ -1.63
SSX4O60224 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.89□□□□□ -1.63
SSX4O60224 RNU1-88P-201ENST00000459274 128 ntBASIC4.89□□□□□ -1.63
SSX4O60224 RN7SL515P-201ENST00000463999 297 ntBASIC4.89□□□□□ -1.63
SSX4O60224 MRE11P1-201ENST00000464884 2127 ntBASIC4.89□□□□□ -1.63
SSX4O60224 AL157777.1-201ENST00000468100 304 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 157 ms