Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SOX1O00570 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC6.87□□□□□ -1.31
SOX1O00570 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
SOX1O00570 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SOX1O00570 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
SOX1O00570 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.87□□□□□ -1.31
SOX1O00570 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SOX1O00570 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SOX1O00570 MTND4P12-201ENST00000498999 1377 ntBASIC6.87□□□□□ -1.31
SOX1O00570 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC6.87□□□□□ -1.31
SOX1O00570 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SOX1O00570 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SOX1O00570 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.87□□□□□ -1.31
SOX1O00570 AC008033.1-201ENST00000216407 1162 ntBASIC6.87□□□□□ -1.31
SOX1O00570 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SOX1O00570 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC6.87□□□□□ -1.31
SOX1O00570 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.87□□□□□ -1.31
SOX1O00570 CIR1P3-201ENST00000405137 479 ntBASIC6.87□□□□□ -1.31
SOX1O00570 AL355375.1-201ENST00000405686 392 ntBASIC6.87□□□□□ -1.31
SOX1O00570 PIGPP2-201ENST00000411569 458 ntBASIC6.87□□□□□ -1.31
SOX1O00570 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.87□□□□□ -1.31
SOX1O00570 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SOX1O00570 RPL21P32-201ENST00000419877 477 ntBASIC6.87□□□□□ -1.31
SOX1O00570 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.87□□□□□ -1.31
SOX1O00570 TRIM60P16-201ENST00000444048 694 ntBASIC6.87□□□□□ -1.31
SOX1O00570 AL512593.1-201ENST00000444758 779 ntBASIC6.87□□□□□ -1.31
SOX1O00570 AC073909.1-201ENST00000447112 999 ntBASIC6.87□□□□□ -1.31
SOX1O00570 RPL23AP35-201ENST00000451906 501 ntBASIC6.87□□□□□ -1.31
SOX1O00570 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC6.87□□□□□ -1.31
SOX1O00570 RN7SL369P-201ENST00000477138 299 ntBASIC6.87□□□□□ -1.31
SOX1O00570 AC117395.1-201ENST00000487390 403 ntBASIC6.87□□□□□ -1.31
SOX1O00570 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.87□□□□□ -1.31
SOX1O00570 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SOX1O00570 SETP21-201ENST00000514799 892 ntBASIC6.87□□□□□ -1.31
SOX1O00570 SCARNA18.1-201ENST00000516330 83 ntBASIC6.87□□□□□ -1.31
SOX1O00570 CYCSP22-201ENST00000517555 339 ntBASIC6.87□□□□□ -1.31
SOX1O00570 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC6.87□□□□□ -1.31
SOX1O00570 AC087808.1-201ENST00000520501 361 ntBASIC6.87□□□□□ -1.31
SOX1O00570 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.87□□□□□ -1.31
SOX1O00570 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
SOX1O00570 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC6.87□□□□□ -1.31
SOX1O00570 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.87□□□□□ -1.31
SOX1O00570 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.87□□□□□ -1.31
SOX1O00570 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.87□□□□□ -1.31
SOX1O00570 AL049840.5-201ENST00000602827 552 ntBASIC6.87□□□□□ -1.31
SOX1O00570 AL390208.1-201ENST00000605885 644 ntBASIC6.87□□□□□ -1.31
SOX1O00570 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.87□□□□□ -1.31
SOX1O00570 AC009994.1-201ENST00000606889 253 ntBASIC6.87□□□□□ -1.31
SOX1O00570 AC064836.2-201ENST00000609491 462 ntBASIC6.87□□□□□ -1.31
SOX1O00570 MIR6793-201ENST00000612376 63 ntBASIC6.87□□□□□ -1.31
SOX1O00570 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
SOX1O00570 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC6.87□□□□□ -1.31
SOX1O00570 MIR193BHG-214ENST00000641765 509 ntBASIC6.87□□□□□ -1.31
SOX1O00570 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC6.87□□□□□ -1.31
SOX1O00570 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SOX1O00570 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC6.87□□□□□ -1.31
SOX1O00570 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.87□□□□□ -1.31
SOX1O00570 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SOX1O00570 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.87□□□□□ -1.31
SOX1O00570 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SOX1O00570 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.87□□□□□ -1.31
SOX1O00570 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
SOX1O00570 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
SOX1O00570 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.87□□□□□ -1.31
SOX1O00570 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SOX1O00570 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC6.87□□□□□ -1.31
SOX1O00570 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SOX1O00570 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SOX1O00570 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SOX1O00570 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SOX1O00570 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.87□□□□□ -1.31
SOX1O00570 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
SOX1O00570 MAPK6PS3-201ENST00000403865 2162 ntBASIC6.86□□□□□ -1.31
SOX1O00570 TMEM75-201ENST00000624314 2165 ntBASIC6.86□□□□□ -1.31
SOX1O00570 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.86□□□□□ -1.31
SOX1O00570 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
SOX1O00570 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.86□□□□□ -1.31
SOX1O00570 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
SOX1O00570 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SOX1O00570 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC6.86□□□□□ -1.31
SOX1O00570 ENSAP3-201ENST00000312710 333 ntBASIC6.86□□□□□ -1.31
SOX1O00570 SNORA21-201ENST00000362423 132 ntBASIC6.86□□□□□ -1.31
SOX1O00570 RNU1-134P-201ENST00000362935 165 ntBASIC6.86□□□□□ -1.31
SOX1O00570 RN7SKP226-201ENST00000364912 300 ntBASIC6.86□□□□□ -1.31
SOX1O00570 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SOX1O00570 MIR525-201ENST00000384978 85 ntBASIC6.86□□□□□ -1.31
SOX1O00570 AP000357.1-201ENST00000409926 1165 ntBASIC6.86□□□□□ -1.31
SOX1O00570 RNU6-575P-201ENST00000411326 105 ntBASIC6.86□□□□□ -1.31
SOX1O00570 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SOX1O00570 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC6.86□□□□□ -1.31
SOX1O00570 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
SOX1O00570 RPL7P36-201ENST00000444633 681 ntBASIC6.86□□□□□ -1.31
SOX1O00570 EEF1B2P6-201ENST00000445713 673 ntBASIC6.86□□□□□ -1.31
SOX1O00570 NFU1P2-201ENST00000448700 469 ntBASIC6.86□□□□□ -1.31
SOX1O00570 AC005077.1-201ENST00000449226 375 ntBASIC6.86□□□□□ -1.31
SOX1O00570 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SOX1O00570 MTND1P11-201ENST00000456661 876 ntBASIC6.86□□□□□ -1.31
SOX1O00570 AC005532.2-201ENST00000467154 373 ntBASIC6.86□□□□□ -1.31
SOX1O00570 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC6.86□□□□□ -1.31
SOX1O00570 AC092989.1-201ENST00000481235 277 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms