Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 RNA5SP183-201ENST00000362452 119 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 RNU5B-1-201ENST00000363286 116 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 RNU4-31P-201ENST00000384211 141 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 AC005042.1-201ENST00000393397 800 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 AL360271.1-201ENST00000395679 510 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 RN7SKP213-201ENST00000410746 298 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 AC010385.1-201ENST00000412374 256 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 REREP1Y-201ENST00000422655 198 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 OSTCP5-201ENST00000425293 453 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 FTLP19-201ENST00000433300 394 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 REREP2Y-201ENST00000439103 200 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 NANOGP9-201ENST00000439890 892 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 AURKAPS1-201ENST00000451805 1212 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 AC026782.2-201ENST00000510845 636 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 AC118465.1-201ENST00000513820 1271 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 RN7SKP99-201ENST00000517028 307 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 AC126615.2-201ENST00000553003 515 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 AC027455.1-201ENST00000574104 594 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 AC234772.3-201ENST00000602277 528 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 AC013444.2-201ENST00000603317 787 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 AC018618.2-201ENST00000604770 446 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 LSM1P2-201ENST00000604911 322 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 AC116651.1-201ENST00000609724 556 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 AC100847.1-201ENST00000611316 481 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 AC068870.2-201ENST00000620635 389 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 AP000676.4-201ENST00000624659 623 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 AP004607.3-201ENST00000530354 3915 ntBASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC187A0A096LP49 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 AC068870.3-201ENST00000625077 2536 ntBASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 AC005725.1-201ENST00000577346 2607 ntBASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 AC005294.1-201ENST00000355509 281 ntBASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 RNA5SP443-201ENST00000363083 132 ntBASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 AL133270.1-201ENST00000402635 279 ntBASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 HMGB1P13-201ENST00000406019 642 ntBASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 AC023128.2-201ENST00000420880 1223 ntBASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 AL365338.1-201ENST00000422282 858 ntBASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 ETF1P3-201ENST00000430422 1160 ntBASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 USP9YP28-201ENST00000435142 589 ntBASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 BX679664.2-201ENST00000439282 283 ntBASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 Z77249.1-201ENST00000444622 1175 ntBASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 VDAC2P4-201ENST00000452925 711 ntBASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 HSPE1P22-201ENST00000456856 327 ntBASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 RPS23P2-201ENST00000463671 415 ntBASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 AC004453.1-201ENST00000487895 408 ntBASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 AC105384.2-201ENST00000508433 640 ntBASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC187A0A096LP49 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms