Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 OR4G1P-203ENST00000641984 1631 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 CUL4AP1-201ENST00000514750 1863 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 AL080317.3-201ENST00000607434 4315 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 LINC00920-201ENST00000499966 2147 ntTSL 2 BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 CYP4Z2P-201ENST00000423332 1512 ntBASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 AL591543.1-202ENST00000642095 4149 ntBASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 RNU6-831P-201ENST00000384548 107 ntBASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 RN7SKP59-201ENST00000410520 314 ntBASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 FTLP17-201ENST00000432567 525 ntBASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 AC015983.1-201ENST00000441577 373 ntBASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 PCNPP5-201ENST00000452246 481 ntBASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 AC007547.1-201ENST00000462177 490 ntBASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 AC128713.1-201ENST00000471495 306 ntBASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 RPS10P28-201ENST00000480396 498 ntBASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 RN7SKP242-201ENST00000515967 289 ntBASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 AC120036.3-201ENST00000517826 292 ntBASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 CDC42P3-201ENST00000518493 633 ntBASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 AC107952.1-201ENST00000524200 376 ntBASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 HNRNPCP8-201ENST00000528764 888 ntBASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 AC018558.5-201ENST00000565840 952 ntBASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 AC141257.3-201ENST00000572906 215 ntBASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 AC092960.1-201ENST00000604762 351 ntBASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 AC093909.6-201ENST00000624757 775 ntBASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 MEIS1-216ENST00000560281 2773 ntTSL 5 BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC9.43□□□□□ -0.9
TRIM35Q9UPQ4 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 AF287957.1-201ENST00000607368 1595 ntBASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 OR5BR1P-201ENST00000524992 1330 ntBASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 RNA5SP472-201ENST00000363868 119 ntBASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 AL589872.1-201ENST00000426602 288 ntBASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 FTH1P20-201ENST00000434913 548 ntBASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 HMGB1P12-201ENST00000438594 598 ntBASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 AC114755.4-201ENST00000439114 443 ntBASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 COX6CP18-201ENST00000448769 222 ntBASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 RPL12P25-201ENST00000455592 494 ntBASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 RPSAP7-201ENST00000456871 885 ntBASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 RPSAP39-201ENST00000467439 883 ntBASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 AC112206.1-201ENST00000468416 477 ntBASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 RN7SL160P-201ENST00000468558 284 ntBASIC9.42□□□□□ -0.9
TRIM35Q9UPQ4 AC090589.1-201ENST00000473109 362 ntBASIC9.42□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms