Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SCN11AQ9UI33 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SCN11AQ9UI33 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SCN11AQ9UI33 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SCN11AQ9UI33 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 CKS1BP6-201ENST00000424932 240 ntBASIC6.08□□□□□ -1.44
SCN11AQ9UI33 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 PPIAP21-201ENST00000464473 501 ntBASIC6.08□□□□□ -1.44
SCN11AQ9UI33 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 AC006349.1-201ENST00000555526 235 ntBASIC6.08□□□□□ -1.44
SCN11AQ9UI33 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 CYCSP40-201ENST00000575927 294 ntBASIC6.08□□□□□ -1.44
SCN11AQ9UI33 AL356218.2-201ENST00000605264 187 ntBASIC6.08□□□□□ -1.44
SCN11AQ9UI33 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 RAD17P1-201ENST00000418130 2042 ntBASIC6.08□□□□□ -1.44
SCN11AQ9UI33 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 AC107068.1-201ENST00000563286 4218 ntBASIC6.08□□□□□ -1.44
SCN11AQ9UI33 ZNF137P-201ENST00000456718 1920 ntBASIC6.08□□□□□ -1.44
SCN11AQ9UI33 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 OR4K17-201ENST00000315543 1032 ntBASIC6.08□□□□□ -1.44
SCN11AQ9UI33 IGKV7-3-201ENST00000357453 298 ntBASIC6.08□□□□□ -1.44
SCN11AQ9UI33 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 FHP1-201ENST00000442741 703 ntBASIC6.08□□□□□ -1.44
SCN11AQ9UI33 AC015795.1-201ENST00000513669 327 ntBASIC6.08□□□□□ -1.44
SCN11AQ9UI33 Y_RNA.719-201ENST00000517156 106 ntBASIC6.08□□□□□ -1.44
SCN11AQ9UI33 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 TRAV8-5-201ENST00000537369 341 ntBASIC6.08□□□□□ -1.44
SCN11AQ9UI33 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN11AQ9UI33 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SCN11AQ9UI33 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.07□□□□□ -1.44
SCN11AQ9UI33 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SCN11AQ9UI33 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SCN11AQ9UI33 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SCN11AQ9UI33 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SCN11AQ9UI33 AL360270.2-201ENST00000562952 5985 ntBASIC6.07□□□□□ -1.44
SCN11AQ9UI33 AL592182.3-201ENST00000642132 3304 ntBASIC6.07□□□□□ -1.44
SCN11AQ9UI33 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SCN11AQ9UI33 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.07□□□□□ -1.44
SCN11AQ9UI33 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.07□□□□□ -1.44
SCN11AQ9UI33 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6.07□□□□□ -1.44
SCN11AQ9UI33 AC092162.1-201ENST00000432828 434 ntBASIC6.07□□□□□ -1.44
SCN11AQ9UI33 NPM1P33-201ENST00000438918 872 ntBASIC6.07□□□□□ -1.44
SCN11AQ9UI33 SCARNA10-201ENST00000459255 330 ntBASIC6.07□□□□□ -1.44
SCN11AQ9UI33 AC108751.3-201ENST00000461814 1020 ntBASIC6.07□□□□□ -1.44
SCN11AQ9UI33 RPL5P12-201ENST00000477071 851 ntBASIC6.07□□□□□ -1.44
SCN11AQ9UI33 AL049874.2-201ENST00000492636 288 ntBASIC6.07□□□□□ -1.44
SCN11AQ9UI33 HMGB1P23-201ENST00000518743 568 ntBASIC6.07□□□□□ -1.44
SCN11AQ9UI33 RPL23AP53-201ENST00000521854 457 ntBASIC6.07□□□□□ -1.44
SCN11AQ9UI33 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.07□□□□□ -1.44
SCN11AQ9UI33 AC005868.1-201ENST00000536421 331 ntBASIC6.07□□□□□ -1.44
SCN11AQ9UI33 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC6.07□□□□□ -1.44
SCN11AQ9UI33 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC6.07□□□□□ -1.44
SCN11AQ9UI33 AC027216.1-201ENST00000577726 685 ntBASIC6.07□□□□□ -1.44
SCN11AQ9UI33 AC069061.3-201ENST00000582254 823 ntBASIC6.07□□□□□ -1.44
SCN11AQ9UI33 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC6.07□□□□□ -1.44
SCN11AQ9UI33 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SCN11AQ9UI33 ASNSP1-204ENST00000641977 1664 ntBASIC6.07□□□□□ -1.44
SCN11AQ9UI33 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SCN11AQ9UI33 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SCN11AQ9UI33 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SCN11AQ9UI33 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SCN11AQ9UI33 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SCN11AQ9UI33 IQCB2P-201ENST00000401788 1633 ntBASIC6.06□□□□□ -1.44
SCN11AQ9UI33 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
SCN11AQ9UI33 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SCN11AQ9UI33 AL732292.1-201ENST00000426692 226 ntBASIC6.06□□□□□ -1.44
SCN11AQ9UI33 AC122718.1-201ENST00000439448 744 ntBASIC6.06□□□□□ -1.44
SCN11AQ9UI33 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SCN11AQ9UI33 FAM133DP-201ENST00000464802 691 ntBASIC6.06□□□□□ -1.44
SCN11AQ9UI33 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.06□□□□□ -1.44
SCN11AQ9UI33 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.06□□□□□ -1.44
SCN11AQ9UI33 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC6.06□□□□□ -1.44
SCN11AQ9UI33 OR7A19P-201ENST00000608051 733 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms