Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 AC008015.1-201ENST00000555505 465 ntBASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 AC026956.1-201ENST00000558741 396 ntBASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 AC015726.1-201ENST00000602353 681 ntBASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 AC011453.2-201ENST00000603737 729 ntBASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 uc_338.9-201ENST00000617424 182 ntBASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 AL157770.1-201ENST00000623049 439 ntBASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 MIR4302-201ENST00000638058 60 ntBASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.81□□□□□ -1.48
CCM2LQ9NUG4 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 SMG1P7-201ENST00000565246 2704 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 HMGB1P5-201ENST00000255320 642 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 RNU6-560P-201ENST00000364007 108 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 MIR16-1-201ENST00000385271 89 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 RNU4-72P-201ENST00000410754 173 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 RNU6-575P-201ENST00000411326 105 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AC007435.1-201ENST00000421086 415 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 MTND4P20-201ENST00000424125 869 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 BX276092.6-201ENST00000430476 250 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AMYP1-201ENST00000440059 1023 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 COL11A2P1-205ENST00000441798 676 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 CUBNP2-201ENST00000443534 1139 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 HMGB1P16-201ENST00000447155 540 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 BX276092.8-201ENST00000455722 250 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 SETP20-201ENST00000457046 852 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AC126121.1-201ENST00000482313 553 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 RPL7P51-201ENST00000490532 749 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AC098799.3-201ENST00000506095 438 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AC026782.2-201ENST00000510845 636 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 RNU6-416P-201ENST00000516265 103 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 TPM3P3-201ENST00000521343 354 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AC121247.2-201ENST00000604776 136 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 RPL12P48-201ENST00000605620 304 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AL451049.1-201ENST00000608672 497 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AL589743.6-201ENST00000611025 117 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AC009090.3-201ENST00000616553 565 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AC023509.5-201ENST00000617434 807 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AC139792.2-201ENST00000624218 587 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 LINC02495-203ENST00000636704 242 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms