Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 VPS35P1-201ENST00000563400 1518 ntBASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 MTCO1P22-201ENST00000604619 1360 ntBASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 SALL4P2-201ENST00000423288 2910 ntBASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 CASC19-206ENST00000641028 1430 ntBASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 GABARAPL3-201ENST00000412799 354 ntBASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 CKS1BP6-201ENST00000424932 240 ntBASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 TMX2P1-201ENST00000436507 708 ntBASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 CYCSP12-201ENST00000437729 300 ntBASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 SPRYD7P1-201ENST00000443861 570 ntBASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 MTCYBP14-201ENST00000457471 715 ntBASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 OR2AO1P-201ENST00000476497 403 ntBASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 RPL7P39-201ENST00000481157 744 ntBASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 RN7SL184P-201ENST00000488308 297 ntBASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 RN7SL441P-201ENST00000492388 296 ntBASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 AC097173.1-201ENST00000505862 819 ntBASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 AC011445.2-201ENST00000599274 173 ntBASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 MIR4302-201ENST00000638058 60 ntBASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 AL359922.3-201ENST00000624779 1670 ntBASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCNB1IP1Q9NPC3 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 RNA5SP132-201ENST00000364725 118 ntBASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 RNU1-149P-201ENST00000390870 161 ntBASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 RPS26P2-201ENST00000440331 348 ntBASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 AC108693.1-201ENST00000496068 432 ntBASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 RPEP1-201ENST00000504507 658 ntBASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 AC011270.1-201ENST00000558606 583 ntBASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 FAM106CP-201ENST00000582212 507 ntBASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 AC004241.3-201ENST00000611728 517 ntBASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 AC007204.2-201ENST00000615022 616 ntBASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 MIR6837-201ENST00000620884 64 ntBASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 AC005332.5-201ENST00000591222 2919 ntBASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.66□□□□□ -1.66
CCNB1IP1Q9NPC3 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
CCNB1IP1Q9NPC3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
CCNB1IP1Q9NPC3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
CCNB1IP1Q9NPC3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCNB1IP1Q9NPC3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCNB1IP1Q9NPC3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.65□□□□□ -1.66
CCNB1IP1Q9NPC3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCNB1IP1Q9NPC3 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.66
CCNB1IP1Q9NPC3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCNB1IP1Q9NPC3 Y_RNA.62-201ENST00000362840 99 ntBASIC4.65□□□□□ -1.67
CCNB1IP1Q9NPC3 RNU6-697P-201ENST00000363348 107 ntBASIC4.65□□□□□ -1.67
CCNB1IP1Q9NPC3 SNORA67-201ENST00000384423 137 ntBASIC4.65□□□□□ -1.67
CCNB1IP1Q9NPC3 MT-RNR1-201ENST00000389680 954 ntBASIC4.65□□□□□ -1.67
CCNB1IP1Q9NPC3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms