Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 Y_RNA.465-201ENST00000384293 102 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 HMGB1P10-201ENST00000395823 563 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 AGR3-202ENST00000402239 563 ntTSL 2 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 MIR548F1-201ENST00000408667 84 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 RNU2-17P-201ENST00000410290 190 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 RN7SKP161-201ENST00000411110 305 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 MTCO3P1-205ENST00000422088 832 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 C1DP1-201ENST00000426049 402 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 COX6CP2-201ENST00000444980 225 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 EPS15P1-201ENST00000448836 336 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 CYCSP42-201ENST00000450823 238 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 SUMO1P1-201ENST00000497904 306 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 SNORA58-201ENST00000505219 137 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 AC113347.3-201ENST00000509113 148 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 RNU6-1334P-201ENST00000516032 105 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 IGLV2-28-201ENST00000520681 304 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 OR4A43P-201ENST00000532938 908 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 AL121579.1-201ENST00000555129 305 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 MIR4489-201ENST00000578869 62 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 AP004372.1-201ENST00000604842 844 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 AC090186.1-201ENST00000605991 572 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 AL352984.2-201ENST00000611153 546 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 AC005840.5-201ENST00000619166 599 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 MIR6719-201ENST00000622428 87 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 OR5AK4P-201ENST00000635912 903 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 SAMMSON-209ENST00000641222 1100 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 CDY11P-201ENST00000447168 1651 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 AL137918.1-201ENST00000624542 1922 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 UGT2B27P-201ENST00000505092 1620 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 AC006213.6-201ENST00000623722 4179 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 AC016716.1-201ENST00000265882 708 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 Y_RNA.813-201ENST00000364639 102 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 Y_RNA.390-201ENST00000383932 102 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 RNU4-74P-201ENST00000411280 161 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 AL713922.1-201ENST00000416477 747 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 RPS27AP7-201ENST00000422792 455 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 AC241584.1-201ENST00000438469 1241 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 AC016908.1-201ENST00000442571 1219 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 AC093392.2-201ENST00000450682 337 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 FDX1P2-201ENST00000450769 375 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 AL445665.1-202ENST00000452436 324 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 GTF2IP12-201ENST00000456547 356 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 AC104849.1-201ENST00000462623 405 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 RPS26P39-201ENST00000469206 341 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 SETP11-201ENST00000473027 690 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 AC135999.1-201ENST00000478962 479 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 HMGB1P36-201ENST00000487709 576 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 AL136038.1-201ENST00000497246 351 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 BNIP3P41-201ENST00000503774 571 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 AC021087.2-201ENST00000504656 1203 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 RPL37P25-201ENST00000507308 276 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 FABP5P5-201ENST00000515537 406 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 WBP1LP3-201ENST00000523033 208 ntBASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.15□□□□□ -1.42
TMEFF1Q8IYR6 AP001317.1-201ENST00000531194 960 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms