Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RNF135Q8IUD6 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RNF135Q8IUD6 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RNF135Q8IUD6 GDI2P1-201ENST00000429312 1336 ntBASIC7.47□□□□□ -1.21
RNF135Q8IUD6 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RNF135Q8IUD6 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RNF135Q8IUD6 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.47□□□□□ -1.21
RNF135Q8IUD6 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
RNF135Q8IUD6 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
RNF135Q8IUD6 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.46□□□□□ -1.21
RNF135Q8IUD6 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
RNF135Q8IUD6 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
RNF135Q8IUD6 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
RNF135Q8IUD6 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
RNF135Q8IUD6 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
RNF135Q8IUD6 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC7.46□□□□□ -1.21
RNF135Q8IUD6 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
RNF135Q8IUD6 WNK1-220ENST00000574564 1401 ntBASIC7.46□□□□□ -1.21
RNF135Q8IUD6 AL031651.1-201ENST00000615357 1438 ntBASIC7.46□□□□□ -1.21
RNF135Q8IUD6 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 Y_RNA.25-201ENST00000362528 102 ntBASIC7.46□□□□□ -1.22
RNF135Q8IUD6 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 RNU6-877P-201ENST00000383868 107 ntBASIC7.46□□□□□ -1.22
RNF135Q8IUD6 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 AL593856.1-201ENST00000419949 805 ntBASIC7.46□□□□□ -1.22
RNF135Q8IUD6 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 PMCHL2-203ENST00000457791 237 ntBASIC7.46□□□□□ -1.22
RNF135Q8IUD6 AC117395.2-201ENST00000463122 1128 ntBASIC7.46□□□□□ -1.22
RNF135Q8IUD6 AC091544.1-201ENST00000484702 348 ntBASIC7.46□□□□□ -1.22
RNF135Q8IUD6 AL035404.1-201ENST00000497982 568 ntBASIC7.46□□□□□ -1.22
RNF135Q8IUD6 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 AC022447.3-201ENST00000506865 495 ntBASIC7.46□□□□□ -1.22
RNF135Q8IUD6 IMPA1P1-201ENST00000510718 842 ntBASIC7.46□□□□□ -1.22
RNF135Q8IUD6 Y_RNA.704-201ENST00000516851 102 ntBASIC7.46□□□□□ -1.22
RNF135Q8IUD6 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 DEFB131D-201ENST00000526803 184 ntBASIC7.46□□□□□ -1.22
RNF135Q8IUD6 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 AC009977.1-201ENST00000586015 570 ntBASIC7.46□□□□□ -1.22
RNF135Q8IUD6 AL121809.2-201ENST00000613169 341 ntBASIC7.46□□□□□ -1.22
RNF135Q8IUD6 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 AC243756.2-201ENST00000618406 463 ntBASIC7.46□□□□□ -1.22
RNF135Q8IUD6 MRPL57P3-201ENST00000619218 176 ntBASIC7.46□□□□□ -1.22
RNF135Q8IUD6 AC145207.9-201ENST00000623802 325 ntBASIC7.46□□□□□ -1.22
RNF135Q8IUD6 AL049541.2-201ENST00000626377 555 ntBASIC7.46□□□□□ -1.22
RNF135Q8IUD6 MIR1321-201ENST00000637766 79 ntBASIC7.46□□□□□ -1.22
RNF135Q8IUD6 CASC19-212ENST00000641153 1287 ntBASIC7.46□□□□□ -1.22
RNF135Q8IUD6 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC7.46□□□□□ -1.22
RNF135Q8IUD6 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RNF135Q8IUD6 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
RNF135Q8IUD6 MAPK6PS2-201ENST00000379571 2060 ntBASIC7.45□□□□□ -1.22
RNF135Q8IUD6 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF135Q8IUD6 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF135Q8IUD6 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF135Q8IUD6 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
RNF135Q8IUD6 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.45□□□□□ -1.22
RNF135Q8IUD6 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RNF135Q8IUD6 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF135Q8IUD6 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RNF135Q8IUD6 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RNF135Q8IUD6 AL355974.1-201ENST00000618896 1708 ntBASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms