Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USF2Q15853 AP000769.2-201ENST00000602344 396 ntBASIC4.22□□□□□ -1.73
USF2Q15853 PPATP2-201ENST00000605635 508 ntBASIC4.22□□□□□ -1.73
USF2Q15853 AL096712.1-201ENST00000614561 159 ntBASIC4.22□□□□□ -1.73
USF2Q15853 AC009318.3-201ENST00000616916 503 ntBASIC4.22□□□□□ -1.73
USF2Q15853 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.22□□□□□ -1.73
USF2Q15853 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USF2Q15853 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.22□□□□□ -1.73
USF2Q15853 MTCO1P1-201ENST00000624263 1081 ntBASIC4.22□□□□□ -1.73
USF2Q15853 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.22□□□□□ -1.73
USF2Q15853 AC073869.8-201ENST00000641806 335 ntBASIC4.22□□□□□ -1.73
USF2Q15853 AC008691.1-209ENST00000642094 814 ntBASIC4.22□□□□□ -1.73
USF2Q15853 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USF2Q15853 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
USF2Q15853 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USF2Q15853 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
USF2Q15853 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
USF2Q15853 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.22□□□□□ -1.73
USF2Q15853 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
USF2Q15853 AC114786.1-201ENST00000512892 1415 ntBASIC4.21□□□□□ -1.73
USF2Q15853 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
USF2Q15853 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
USF2Q15853 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
USF2Q15853 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.21□□□□□ -1.74
USF2Q15853 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
USF2Q15853 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
USF2Q15853 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USF2Q15853 MIR551A-201ENST00000385042 96 ntBASIC4.21□□□□□ -1.74
USF2Q15853 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.21□□□□□ -1.74
USF2Q15853 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.21□□□□□ -1.74
USF2Q15853 ATG4AP1-201ENST00000416893 538 ntBASIC4.21□□□□□ -1.74
USF2Q15853 MTCO3P21-201ENST00000430791 643 ntBASIC4.21□□□□□ -1.74
USF2Q15853 RPS6P12-201ENST00000432491 726 ntBASIC4.21□□□□□ -1.74
USF2Q15853 DNAJA1P5-201ENST00000440278 943 ntBASIC4.21□□□□□ -1.74
USF2Q15853 AC016772.1-201ENST00000444170 1261 ntBASIC4.21□□□□□ -1.74
USF2Q15853 CYCSP24-201ENST00000445119 316 ntBASIC4.21□□□□□ -1.74
USF2Q15853 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.21□□□□□ -1.74
USF2Q15853 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
USF2Q15853 MYO5BP2-201ENST00000449815 1277 ntBASIC4.21□□□□□ -1.74
USF2Q15853 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.21□□□□□ -1.74
USF2Q15853 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.21□□□□□ -1.74
USF2Q15853 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.21□□□□□ -1.74
USF2Q15853 HMGN1P9-201ENST00000515212 298 ntBASIC4.21□□□□□ -1.74
USF2Q15853 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.21□□□□□ -1.74
USF2Q15853 RNU6-319P-201ENST00000516025 108 ntBASIC4.21□□□□□ -1.74
USF2Q15853 SCARNA20.4-201ENST00000516969 131 ntBASIC4.21□□□□□ -1.74
USF2Q15853 SNORA43.3-201ENST00000517240 103 ntBASIC4.21□□□□□ -1.74
USF2Q15853 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.21□□□□□ -1.74
USF2Q15853 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.21□□□□□ -1.74
USF2Q15853 AC092709.1-201ENST00000521355 1045 ntBASIC4.21□□□□□ -1.74
USF2Q15853 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.21□□□□□ -1.74
USF2Q15853 EIF4EP5-201ENST00000528228 640 ntBASIC4.21□□□□□ -1.74
USF2Q15853 OR8G3P-201ENST00000533406 921 ntBASIC4.21□□□□□ -1.74
USF2Q15853 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.21□□□□□ -1.74
USF2Q15853 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.21□□□□□ -1.74
USF2Q15853 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.21□□□□□ -1.74
USF2Q15853 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.21□□□□□ -1.74
USF2Q15853 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.21□□□□□ -1.74
USF2Q15853 AC079600.1-201ENST00000550326 297 ntBASIC4.21□□□□□ -1.74
USF2Q15853 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.21□□□□□ -1.74
USF2Q15853 OR11H3P-201ENST00000554547 982 ntBASIC4.21□□□□□ -1.74
USF2Q15853 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.21□□□□□ -1.74
USF2Q15853 AC040958.1-201ENST00000561102 201 ntBASIC4.21□□□□□ -1.74
USF2Q15853 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.21□□□□□ -1.74
USF2Q15853 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.21□□□□□ -1.74
USF2Q15853 MRPS21P7-201ENST00000566937 238 ntBASIC4.21□□□□□ -1.74
USF2Q15853 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.21□□□□□ -1.74
USF2Q15853 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.21□□□□□ -1.74
USF2Q15853 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.21□□□□□ -1.74
USF2Q15853 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.21□□□□□ -1.74
USF2Q15853 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USF2Q15853 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.21□□□□□ -1.74
USF2Q15853 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.21□□□□□ -1.74
USF2Q15853 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.21□□□□□ -1.74
USF2Q15853 AL139286.1-201ENST00000604465 483 ntBASIC4.21□□□□□ -1.74
USF2Q15853 AL365181.4-201ENST00000609800 547 ntBASIC4.21□□□□□ -1.74
USF2Q15853 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.21□□□□□ -1.74
USF2Q15853 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.21□□□□□ -1.74
USF2Q15853 AL354950.1-201ENST00000614150 568 ntBASIC4.21□□□□□ -1.74
USF2Q15853 AC135068.5-201ENST00000624197 983 ntBASIC4.21□□□□□ -1.74
USF2Q15853 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.21□□□□□ -1.74
USF2Q15853 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
USF2Q15853 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.21□□□□□ -1.74
USF2Q15853 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
USF2Q15853 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USF2Q15853 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
USF2Q15853 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USF2Q15853 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
USF2Q15853 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.21□□□□□ -1.74
USF2Q15853 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.21□□□□□ -1.74
USF2Q15853 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
USF2Q15853 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.21□□□□□ -1.74
USF2Q15853 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.21□□□□□ -1.74
USF2Q15853 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USF2Q15853 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
USF2Q15853 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
USF2Q15853 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
USF2Q15853 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.2□□□□□ -1.74
USF2Q15853 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
USF2Q15853 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms