Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RIPK4P57078 AC114755.2-201ENST00000413520 361 ntBASIC6.35□□□□□ -1.39
RIPK4P57078 AC007738.1-201ENST00000413892 348 ntBASIC6.35□□□□□ -1.39
RIPK4P57078 AC104333.2-201ENST00000422630 192 ntBASIC6.35□□□□□ -1.39
RIPK4P57078 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.35□□□□□ -1.39
RIPK4P57078 USP9YP9-201ENST00000429406 715 ntBASIC6.35□□□□□ -1.39
RIPK4P57078 HSPE1P27-201ENST00000430808 296 ntBASIC6.35□□□□□ -1.39
RIPK4P57078 AC092162.1-201ENST00000432828 434 ntBASIC6.35□□□□□ -1.39
RIPK4P57078 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.35□□□□□ -1.39
RIPK4P57078 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.35□□□□□ -1.39
RIPK4P57078 RPL36AP15-201ENST00000444514 266 ntBASIC6.35□□□□□ -1.39
RIPK4P57078 OR1H1P-201ENST00000448731 937 ntBASIC6.35□□□□□ -1.39
RIPK4P57078 Y_RNA.719-201ENST00000517156 106 ntBASIC6.35□□□□□ -1.39
RIPK4P57078 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.35□□□□□ -1.39
RIPK4P57078 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.35□□□□□ -1.39
RIPK4P57078 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RIPK4P57078 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.35□□□□□ -1.39
RIPK4P57078 AC090220.1-201ENST00000593078 1699 ntBASIC6.35□□□□□ -1.39
RIPK4P57078 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
RIPK4P57078 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RIPK4P57078 SDAD1P1-202ENST00000524156 2051 ntBASIC6.35□□□□□ -1.39
RIPK4P57078 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
RIPK4P57078 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
RIPK4P57078 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RIPK4P57078 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RIPK4P57078 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.35□□□□□ -1.39
RIPK4P57078 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RIPK4P57078 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.34□□□□□ -1.39
RIPK4P57078 AC104623.2-202ENST00000623477 4002 ntBASIC6.34□□□□□ -1.39
RIPK4P57078 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RIPK4P57078 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
RIPK4P57078 RN7SKP100-201ENST00000411258 284 ntBASIC6.34□□□□□ -1.39
RIPK4P57078 RSU1P3-201ENST00000412878 835 ntBASIC6.34□□□□□ -1.39
RIPK4P57078 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.34□□□□□ -1.39
RIPK4P57078 NRBF2P3-201ENST00000432731 865 ntBASIC6.34□□□□□ -1.39
RIPK4P57078 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.34□□□□□ -1.39
RIPK4P57078 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.34□□□□□ -1.39
RIPK4P57078 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.34□□□□□ -1.39
RIPK4P57078 RN7SKP276-201ENST00000516242 268 ntBASIC6.34□□□□□ -1.39
RIPK4P57078 RNU6-709P-201ENST00000517257 104 ntBASIC6.34□□□□□ -1.39
RIPK4P57078 OR8A2P-201ENST00000528631 952 ntBASIC6.34□□□□□ -1.39
RIPK4P57078 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC6.34□□□□□ -1.39
RIPK4P57078 AC093249.4-201ENST00000564755 259 ntBASIC6.34□□□□□ -1.39
RIPK4P57078 AC006272.2-201ENST00000594725 163 ntBASIC6.34□□□□□ -1.39
RIPK4P57078 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC6.34□□□□□ -1.39
RIPK4P57078 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
RIPK4P57078 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
RIPK4P57078 TLK1P1-201ENST00000456760 2440 ntBASIC6.34□□□□□ -1.4
RIPK4P57078 AC100778.3-201ENST00000580060 1750 ntBASIC6.34□□□□□ -1.4
RIPK4P57078 SMG1P6-201ENST00000532337 2930 ntBASIC6.33□□□□□ -1.4
RIPK4P57078 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC6.33□□□□□ -1.4
RIPK4P57078 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RIPK4P57078 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
RIPK4P57078 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
RIPK4P57078 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.33□□□□□ -1.4
RIPK4P57078 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RIPK4P57078 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RIPK4P57078 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.33□□□□□ -1.4
RIPK4P57078 RPS17P8-201ENST00000434525 335 ntBASIC6.33□□□□□ -1.4
RIPK4P57078 SCARNA22-201ENST00000503991 125 ntBASIC6.33□□□□□ -1.4
RIPK4P57078 BUD31P1-201ENST00000521828 359 ntBASIC6.33□□□□□ -1.4
RIPK4P57078 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.33□□□□□ -1.4
RIPK4P57078 AC133555.2-201ENST00000550213 292 ntBASIC6.33□□□□□ -1.4
RIPK4P57078 AL049830.4-201ENST00000555149 351 ntBASIC6.33□□□□□ -1.4
RIPK4P57078 RN7SL802P-201ENST00000577858 299 ntBASIC6.33□□□□□ -1.4
RIPK4P57078 MIR5699-201ENST00000578903 90 ntBASIC6.33□□□□□ -1.4
RIPK4P57078 AC091042.1-201ENST00000579213 173 ntBASIC6.33□□□□□ -1.4
RIPK4P57078 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
RIPK4P57078 AL512782.1-201ENST00000603093 364 ntBASIC6.33□□□□□ -1.4
RIPK4P57078 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.33□□□□□ -1.4
RIPK4P57078 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
RIPK4P57078 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
RIPK4P57078 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC6.33□□□□□ -1.4
RIPK4P57078 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
RIPK4P57078 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.32□□□□□ -1.4
RIPK4P57078 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.32□□□□□ -1.4
RIPK4P57078 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.32□□□□□ -1.4
RIPK4P57078 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RIPK4P57078 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RIPK4P57078 RN7SKP97-201ENST00000410966 333 ntBASIC6.32□□□□□ -1.4
RIPK4P57078 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.32□□□□□ -1.4
RIPK4P57078 LINC00993-201ENST00000420453 540 ntBASIC6.32□□□□□ -1.4
RIPK4P57078 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.32□□□□□ -1.4
RIPK4P57078 AC005154.2-201ENST00000438110 379 ntBASIC6.32□□□□□ -1.4
RIPK4P57078 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.32□□□□□ -1.4
RIPK4P57078 BTF3P6-201ENST00000448054 499 ntBASIC6.32□□□□□ -1.4
RIPK4P57078 RPS5P7-201ENST00000456664 608 ntBASIC6.32□□□□□ -1.4
RIPK4P57078 RPS4XP12-201ENST00000461747 709 ntBASIC6.32□□□□□ -1.4
RIPK4P57078 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC6.32□□□□□ -1.4
RIPK4P57078 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.32□□□□□ -1.4
RIPK4P57078 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.32□□□□□ -1.4
RIPK4P57078 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.32□□□□□ -1.4
RIPK4P57078 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC6.32□□□□□ -1.4
RIPK4P57078 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC6.32□□□□□ -1.4
RIPK4P57078 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.32□□□□□ -1.4
RIPK4P57078 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RIPK4P57078 AC000374.1-201ENST00000434698 1745 ntBASIC6.32□□□□□ -1.4
RIPK4P57078 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RIPK4P57078 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
RIPK4P57078 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms