Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.15□□□□□ -1.59
MSH3P20585 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.15□□□□□ -1.59
MSH3P20585 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.15□□□□□ -1.59
MSH3P20585 AC134349.2-201ENST00000535136 910 ntBASIC5.15□□□□□ -1.59
MSH3P20585 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.15□□□□□ -1.59
MSH3P20585 AC068993.1-201ENST00000546724 589 ntBASIC5.15□□□□□ -1.59
MSH3P20585 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
MSH3P20585 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.15□□□□□ -1.59
MSH3P20585 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.15□□□□□ -1.59
MSH3P20585 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.15□□□□□ -1.59
MSH3P20585 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
MSH3P20585 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.15□□□□□ -1.59
MSH3P20585 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.15□□□□□ -1.59
MSH3P20585 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.15□□□□□ -1.59
MSH3P20585 QTRT1P1-201ENST00000604344 1078 ntBASIC5.15□□□□□ -1.59
MSH3P20585 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.15□□□□□ -1.59
MSH3P20585 AC118658.2-201ENST00000618697 459 ntBASIC5.15□□□□□ -1.59
MSH3P20585 AC006249.1-201ENST00000621223 471 ntBASIC5.15□□□□□ -1.59
MSH3P20585 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
MSH3P20585 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
MSH3P20585 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
MSH3P20585 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
MSH3P20585 AC087565.3-202ENST00000642085 1603 ntBASIC5.15□□□□□ -1.59
MSH3P20585 SMG1P7-201ENST00000565246 2704 ntBASIC5.15□□□□□ -1.59
MSH3P20585 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
MSH3P20585 AL450345.1-202ENST00000605741 3881 ntBASIC5.15□□□□□ -1.59
MSH3P20585 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
MSH3P20585 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
MSH3P20585 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.14□□□□□ -1.59
MSH3P20585 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
MSH3P20585 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
MSH3P20585 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
MSH3P20585 SAMMSON-213ENST00000641336 1521 ntBASIC5.14□□□□□ -1.59
MSH3P20585 AL034549.2-201ENST00000618285 3373 ntBASIC5.14□□□□□ -1.59
MSH3P20585 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.14□□□□□ -1.59
MSH3P20585 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.14□□□□□ -1.59
MSH3P20585 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.14□□□□□ -1.59
MSH3P20585 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
MSH3P20585 NUDT19P3-201ENST00000404698 555 ntBASIC5.14□□□□□ -1.59
MSH3P20585 AMZ2P2-201ENST00000406819 1057 ntBASIC5.14□□□□□ -1.59
MSH3P20585 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.14□□□□□ -1.59
MSH3P20585 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.14□□□□□ -1.59
MSH3P20585 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.14□□□□□ -1.59
MSH3P20585 RPS4XP16-201ENST00000427198 791 ntBASIC5.14□□□□□ -1.59
MSH3P20585 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.14□□□□□ -1.59
MSH3P20585 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
MSH3P20585 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.14□□□□□ -1.59
MSH3P20585 AC046176.1-201ENST00000435260 1170 ntBASIC5.14□□□□□ -1.59
MSH3P20585 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.14□□□□□ -1.59
MSH3P20585 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.14□□□□□ -1.59
MSH3P20585 CYCSP24-201ENST00000445119 316 ntBASIC5.14□□□□□ -1.59
MSH3P20585 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.14□□□□□ -1.59
MSH3P20585 AL389915.2-201ENST00000454576 441 ntBASIC5.14□□□□□ -1.59
MSH3P20585 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.14□□□□□ -1.59
MSH3P20585 RPS4XP14-201ENST00000493072 781 ntBASIC5.14□□□□□ -1.59
MSH3P20585 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.14□□□□□ -1.59
MSH3P20585 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.14□□□□□ -1.59
MSH3P20585 RNA5SP92-201ENST00000516437 110 ntBASIC5.14□□□□□ -1.59
MSH3P20585 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
MSH3P20585 AC100784.1-201ENST00000522790 310 ntBASIC5.14□□□□□ -1.59
MSH3P20585 OR10G5P-201ENST00000532733 358 ntBASIC5.14□□□□□ -1.59
MSH3P20585 LSM3P2-201ENST00000551246 273 ntBASIC5.14□□□□□ -1.59
MSH3P20585 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.14□□□□□ -1.59
MSH3P20585 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.14□□□□□ -1.59
MSH3P20585 AC022884.2-201ENST00000578535 580 ntBASIC5.14□□□□□ -1.59
MSH3P20585 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.14□□□□□ -1.59
MSH3P20585 LINC00216-201ENST00000623548 1126 ntBASIC5.14□□□□□ -1.59
MSH3P20585 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.14□□□□□ -1.59
MSH3P20585 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.14□□□□□ -1.59
MSH3P20585 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.14□□□□□ -1.59
MSH3P20585 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
MSH3P20585 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
MSH3P20585 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
MSH3P20585 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
MSH3P20585 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.14□□□□□ -1.59
MSH3P20585 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
MSH3P20585 PCAT14-202ENST00000627127 3935 ntBASIC5.14□□□□□ -1.59
MSH3P20585 AC073136.1-201ENST00000449426 2884 ntBASIC5.14□□□□□ -1.59
MSH3P20585 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
MSH3P20585 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
MSH3P20585 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.13□□□□□ -1.59
MSH3P20585 AC006210.2-201ENST00000367074 1545 ntBASIC5.13□□□□□ -1.59
MSH3P20585 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
MSH3P20585 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.13□□□□□ -1.59
MSH3P20585 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.13□□□□□ -1.59
MSH3P20585 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.13□□□□□ -1.59
MSH3P20585 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
MSH3P20585 RNU6-697P-201ENST00000363348 107 ntBASIC5.13□□□□□ -1.59
MSH3P20585 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
MSH3P20585 CCNB2P1-201ENST00000399411 1150 ntBASIC5.13□□□□□ -1.59
MSH3P20585 AC211486.3-201ENST00000412694 621 ntBASIC5.13□□□□□ -1.59
MSH3P20585 ARAFP1-201ENST00000422172 605 ntBASIC5.13□□□□□ -1.59
MSH3P20585 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.13□□□□□ -1.59
MSH3P20585 MTND2P25-201ENST00000449028 610 ntBASIC5.13□□□□□ -1.59
MSH3P20585 BX842559.2-201ENST00000451418 605 ntBASIC5.13□□□□□ -1.59
MSH3P20585 AC245028.2-201ENST00000458673 253 ntBASIC5.13□□□□□ -1.59
MSH3P20585 AC108161.1-201ENST00000461060 402 ntBASIC5.13□□□□□ -1.59
MSH3P20585 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.13□□□□□ -1.59
MSH3P20585 RN7SL222P-201ENST00000476452 299 ntBASIC5.13□□□□□ -1.59
MSH3P20585 RN7SL177P-201ENST00000476596 299 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms