Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 MIR6810-201ENST00000622701 70 ntBASIC4.39□□□□□ -1.71
FREM3P0C091 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
FREM3P0C091 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.39□□□□□ -1.71
FREM3P0C091 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
FREM3P0C091 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
FREM3P0C091 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.38□□□□□ -1.71
FREM3P0C091 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.38□□□□□ -1.71
FREM3P0C091 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
FREM3P0C091 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
FREM3P0C091 LRRC37BP1-201ENST00000398851 714 ntBASIC4.38□□□□□ -1.71
FREM3P0C091 FABP12P1-201ENST00000401911 322 ntBASIC4.38□□□□□ -1.71
FREM3P0C091 CKS1BP6-201ENST00000424932 240 ntBASIC4.38□□□□□ -1.71
FREM3P0C091 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.38□□□□□ -1.71
FREM3P0C091 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.38□□□□□ -1.71
FREM3P0C091 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.38□□□□□ -1.71
FREM3P0C091 AL356390.1-201ENST00000455684 397 ntBASIC4.38□□□□□ -1.71
FREM3P0C091 FTH1P2-201ENST00000466086 412 ntBASIC4.38□□□□□ -1.71
FREM3P0C091 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.38□□□□□ -1.71
FREM3P0C091 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.38□□□□□ -1.71
FREM3P0C091 RN7SL371P-201ENST00000578099 267 ntBASIC4.38□□□□□ -1.71
FREM3P0C091 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.38□□□□□ -1.71
FREM3P0C091 AC011815.3-201ENST00000624194 473 ntBASIC4.38□□□□□ -1.71
FREM3P0C091 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC4.38□□□□□ -1.71
FREM3P0C091 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.38□□□□□ -1.71
FREM3P0C091 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
FREM3P0C091 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.38□□□□□ -1.71
FREM3P0C091 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
FREM3P0C091 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
FREM3P0C091 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
FREM3P0C091 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
FREM3P0C091 AL672167.1-205ENST00000641112 3080 ntBASIC4.38□□□□□ -1.71
FREM3P0C091 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
FREM3P0C091 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
FREM3P0C091 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
FREM3P0C091 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 RNA5SP191-201ENST00000362585 102 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 U3.23-201ENST00000391132 200 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 AP000580.1-201ENST00000404439 358 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
FREM3P0C091 AC069213.2-201ENST00000420238 366 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 AC097523.2-201ENST00000435551 652 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.37□□□□□ -1.71
FREM3P0C091 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.37□□□□□ -1.71
FREM3P0C091 MORF4L1P4-201ENST00000450245 976 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 AC096741.1-201ENST00000472250 846 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 AC007686.1-201ENST00000488511 463 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.37□□□□□ -1.71
FREM3P0C091 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.37□□□□□ -1.71
FREM3P0C091 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.37□□□□□ -1.71
FREM3P0C091 EDDM3DP-201ENST00000554692 434 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC4.37□□□□□ -1.71
FREM3P0C091 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.37□□□□□ -1.71
FREM3P0C091 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.37□□□□□ -1.71
FREM3P0C091 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
FREM3P0C091 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
FREM3P0C091 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.37□□□□□ -1.71
FREM3P0C091 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
FREM3P0C091 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
FREM3P0C091 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
FREM3P0C091 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
FREM3P0C091 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
FREM3P0C091 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.37□□□□□ -1.71
FREM3P0C091 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
FREM3P0C091 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
FREM3P0C091 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
FREM3P0C091 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.37□□□□□ -1.71
FREM3P0C091 AC132825.1-201ENST00000463573 2247 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
FREM3P0C091 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
FREM3P0C091 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
FREM3P0C091 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
FREM3P0C091 MIR192-201ENST00000384915 110 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 MIR141-201ENST00000384975 95 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 RPA2P2-201ENST00000419698 796 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.37□□□□□ -1.71
FREM3P0C091 AC004074.1-201ENST00000421810 1063 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
FREM3P0C091 TPT1P12-201ENST00000448968 492 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 AC116562.1-201ENST00000485355 781 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 AC069304.1-201ENST00000491593 704 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.37□□□□□ -1.71
FREM3P0C091 AC138832.1-201ENST00000522871 556 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 AL512310.9-201ENST00000553311 948 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 AGGF1P9-201ENST00000561884 913 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 AC011840.5-201ENST00000582125 771 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.37□□□□□ -1.71
FREM3P0C091 AC234771.5-201ENST00000600161 514 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 AC007497.1-201ENST00000610421 561 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 AC135068.12-201ENST00000637370 931 ntBASIC4.37□□□□□ -1.71
FREM3P0C091 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
FREM3P0C091 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
FREM3P0C091 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
FREM3P0C091 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
FREM3P0C091 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
FREM3P0C091 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FREM3P0C091 AL672167.1-203ENST00000641299 2975 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
FREM3P0C091 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FREM3P0C091 AC136624.1-201ENST00000400791 413 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 RN7SKP106-201ENST00000410832 272 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms