Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
USH2AO75445 U3.10-201ENST00000364459 214 ntBASIC2.08□□□□□ -2.08
USH2AO75445 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC2.08□□□□□ -2.08
USH2AO75445 GLUD1P9-201ENST00000420997 1173 ntBASIC2.08□□□□□ -2.08
USH2AO75445 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC2.08□□□□□ -2.08
USH2AO75445 DHFRP3-201ENST00000455595 559 ntBASIC2.08□□□□□ -2.08
USH2AO75445 RN7SL189P-201ENST00000468631 289 ntBASIC2.08□□□□□ -2.08
USH2AO75445 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC2.08□□□□□ -2.08
USH2AO75445 RFPL4AP5-201ENST00000514977 504 ntBASIC2.08□□□□□ -2.08
USH2AO75445 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.08□□□□□ -2.08
USH2AO75445 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.08□□□□□ -2.08
USH2AO75445 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC2.08□□□□□ -2.08
USH2AO75445 AC010424.2-201ENST00000607594 443 ntBASIC2.08□□□□□ -2.08
USH2AO75445 MIR7975-201ENST00000619350 68 ntBASIC2.08□□□□□ -2.08
USH2AO75445 MVP-219ENST00000629059 120 ntTSL 5 BASIC2.08□□□□□ -2.08
USH2AO75445 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
USH2AO75445 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 SON-202ENST00000356577 8813 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.08□□□□□ -2.08
USH2AO75445 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 STK3-216ENST00000523601 3107 ntTSL 2 BASIC2.08□□□□□ -2.08
USH2AO75445 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC2.08□□□□□ -2.08
USH2AO75445 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC2.08□□□□□ -2.08
USH2AO75445 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC2.08□□□□□ -2.08
USH2AO75445 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC2.08□□□□□ -2.08
USH2AO75445 AC009229.4-201ENST00000623854 1947 ntBASIC2.08□□□□□ -2.08
USH2AO75445 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
USH2AO75445 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC2.07□□□□□ -2.08
USH2AO75445 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
USH2AO75445 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
USH2AO75445 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 AC073410.1-201ENST00000435125 589 ntBASIC2.07□□□□□ -2.08
USH2AO75445 RPL37P3-201ENST00000456825 293 ntBASIC2.07□□□□□ -2.08
USH2AO75445 RPL21P8-201ENST00000465083 535 ntBASIC2.07□□□□□ -2.08
USH2AO75445 AC074250.1-201ENST00000511117 192 ntBASIC2.07□□□□□ -2.08
USH2AO75445 FTH1P9-201ENST00000513251 355 ntBASIC2.07□□□□□ -2.08
USH2AO75445 GAPDHP62-201ENST00000515313 990 ntBASIC2.07□□□□□ -2.08
USH2AO75445 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC2.07□□□□□ -2.08
USH2AO75445 MIR5195-201ENST00000583555 115 ntBASIC2.07□□□□□ -2.08
USH2AO75445 AC099669.2-201ENST00000616549 437 ntBASIC2.07□□□□□ -2.08
USH2AO75445 AP001885.1-201ENST00000621658 558 ntBASIC2.07□□□□□ -2.08
USH2AO75445 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
USH2AO75445 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC2.07□□□□□ -2.08
USH2AO75445 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
USH2AO75445 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC2.07□□□□□ -2.08
USH2AO75445 AC021146.4-201ENST00000309229 279 ntBASIC2.07□□□□□ -2.08
USH2AO75445 RPS17P17-201ENST00000419392 409 ntBASIC2.07□□□□□ -2.08
USH2AO75445 NPM1P41-201ENST00000512920 831 ntBASIC2.07□□□□□ -2.08
USH2AO75445 TBCA-203ENST00000517679 545 ntTSL 3 BASIC2.07□□□□□ -2.08
USH2AO75445 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC2.07□□□□□ -2.08
USH2AO75445 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.07□□□□□ -2.08
USH2AO75445 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.07□□□□□ -2.08
USH2AO75445 AGGF1P9-201ENST00000561884 913 ntBASIC2.07□□□□□ -2.08
USH2AO75445 AC013412.1-201ENST00000610687 192 ntBASIC2.07□□□□□ -2.08
USH2AO75445 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC2.07□□□□□ -2.08
USH2AO75445 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
USH2AO75445 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC2.07□□□□□ -2.08
USH2AO75445 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC2.07□□□□□ -2.08
USH2AO75445 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
USH2AO75445 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC2.07□□□□□ -2.08
USH2AO75445 BCAT1-201ENST00000261192 9674 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC2.07□□□□□ -2.08
USH2AO75445 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC2.07□□□□□ -2.08
USH2AO75445 PRKG1-204ENST00000373985 6487 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 FBN2-204ENST00000508053 11132 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
USH2AO75445 AL121977.1-201ENST00000401636 979 ntBASIC2.07□□□□□ -2.08
USH2AO75445 AC007568.1-201ENST00000422912 471 ntBASIC2.07□□□□□ -2.08
USH2AO75445 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC2.07□□□□□ -2.08
USH2AO75445 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC2.07□□□□□ -2.08
USH2AO75445 AC097486.1-201ENST00000515331 210 ntBASIC2.07□□□□□ -2.08
USH2AO75445 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC2.07□□□□□ -2.08
USH2AO75445 DYNLL1P4-201ENST00000549314 266 ntBASIC2.07□□□□□ -2.08
USH2AO75445 LGI1-209ENST00000627699 664 ntTSL 3 BASIC2.07□□□□□ -2.08
USH2AO75445 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
USH2AO75445 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC2.07□□□□□ -2.08
USH2AO75445 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
USH2AO75445 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms