Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 OR1F1-201ENST00000304646 942 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 TGIF2LY-201ENST00000321217 905 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 SNORD27-201ENST00000363981 72 ntBASIC7.79□□□□□ -1.16
LHX6Q9UPM6 RNU6-744P-201ENST00000365557 107 ntBASIC7.79□□□□□ -1.16
LHX6Q9UPM6 RNU6-1316P-201ENST00000384242 108 ntBASIC7.79□□□□□ -1.16
LHX6Q9UPM6 MIR613-201ENST00000385248 95 ntBASIC7.79□□□□□ -1.16
LHX6Q9UPM6 MORF4L1P1-201ENST00000404582 967 ntBASIC7.79□□□□□ -1.16
LHX6Q9UPM6 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 RPL21P88-201ENST00000436649 436 ntBASIC7.79□□□□□ -1.16
LHX6Q9UPM6 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 AL138899.2-201ENST00000439139 499 ntBASIC7.79□□□□□ -1.16
LHX6Q9UPM6 AC099799.1-201ENST00000439809 192 ntBASIC7.79□□□□□ -1.16
LHX6Q9UPM6 AL034397.1-201ENST00000456392 908 ntBASIC7.79□□□□□ -1.16
LHX6Q9UPM6 AC104563.1-201ENST00000476147 376 ntBASIC7.79□□□□□ -1.16
LHX6Q9UPM6 AC022215.1-201ENST00000481770 362 ntBASIC7.79□□□□□ -1.16
LHX6Q9UPM6 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 AC011005.3-201ENST00000491624 395 ntBASIC7.79□□□□□ -1.16
LHX6Q9UPM6 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 AC018653.2-201ENST00000540190 238 ntBASIC7.79□□□□□ -1.16
LHX6Q9UPM6 GSTZ1-216ENST00000556627 919 ntTSL 3 BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 AC037198.1-201ENST00000560769 281 ntTSL 3 BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 MIR7162-201ENST00000611134 69 ntBASIC7.79□□□□□ -1.16
LHX6Q9UPM6 AL138726.1-201ENST00000614873 333 ntBASIC7.79□□□□□ -1.16
LHX6Q9UPM6 ATP5A1P2-202ENST00000616464 443 ntBASIC7.79□□□□□ -1.16
LHX6Q9UPM6 Metazoa_SRP.115-201ENST00000619303 284 ntBASIC7.79□□□□□ -1.16
LHX6Q9UPM6 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 AC068512.1-201ENST00000584542 1811 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 EEF1A1P10-201ENST00000475365 1390 ntBASIC7.79□□□□□ -1.16
LHX6Q9UPM6 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 GOSR2-234ENST00000640138 3408 ntTSL 5 BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 KIAA0391-205ENST00000603544 2232 ntTSL 5 BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 MARK3-203ENST00000335102 2331 ntTSL 5 BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 SLFN12-206ENST00000452764 2423 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 AC007614.2-201ENST00000569877 1851 ntBASIC7.79□□□□□ -1.16
LHX6Q9UPM6 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 BUB1-212ENST00000535254 3576 ntTSL 2 BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LHX6Q9UPM6 TRAF3IP2-AS1-209ENST00000532226 2191 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 TP63-202ENST00000320472 2032 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 AL353132.1-201ENST00000415260 2043 ntBASIC7.78□□□□□ -1.16
LHX6Q9UPM6 TP63-210ENST00000440651 2031 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 OR7A17-203ENST00000642123 3565 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 MAPK10-371ENST00000641952 5209 ntBASIC7.78□□□□□ -1.16
LHX6Q9UPM6 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 VIT-202ENST00000379242 2810 ntAPPRIS P3 TSL 2 BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 RNU6-853P-201ENST00000364306 107 ntBASIC7.78□□□□□ -1.16
LHX6Q9UPM6 Y_RNA.539-201ENST00000384635 107 ntBASIC7.78□□□□□ -1.16
LHX6Q9UPM6 RNA5SP18-201ENST00000390935 121 ntBASIC7.78□□□□□ -1.16
LHX6Q9UPM6 RNA5SP105-201ENST00000391123 113 ntBASIC7.78□□□□□ -1.16
LHX6Q9UPM6 U3.25-201ENST00000391209 220 ntBASIC7.78□□□□□ -1.16
LHX6Q9UPM6 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 Y_RNA.594-201ENST00000410373 140 ntBASIC7.78□□□□□ -1.16
LHX6Q9UPM6 RPE-204ENST00000411934 792 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 AL513302.1-201ENST00000415679 428 ntBASIC7.78□□□□□ -1.16
LHX6Q9UPM6 LINCMD1-201ENST00000418518 462 ntTSL 5 BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 PUDPP1-201ENST00000421058 495 ntBASIC7.78□□□□□ -1.16
LHX6Q9UPM6 ELOCP20-201ENST00000422460 345 ntBASIC7.78□□□□□ -1.16
LHX6Q9UPM6 RPL23AP89-201ENST00000439324 255 ntBASIC7.78□□□□□ -1.16
LHX6Q9UPM6 CYP2C56P-201ENST00000440076 291 ntBASIC7.78□□□□□ -1.16
LHX6Q9UPM6 AC019185.1-201ENST00000442718 389 ntBASIC7.78□□□□□ -1.16
LHX6Q9UPM6 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 AL118520.1-201ENST00000450770 291 ntBASIC7.78□□□□□ -1.16
LHX6Q9UPM6 AC009229.1-201ENST00000450854 622 ntTSL 4 BASIC7.78□□□□□ -1.16
LHX6Q9UPM6 AL445687.2-201ENST00000458156 728 ntBASIC7.78□□□□□ -1.16
LHX6Q9UPM6 RPS15AP17-201ENST00000470598 390 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms