Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
LRCH3Q96II8 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
LRCH3Q96II8 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 RNU6-831P-201ENST00000384548 107 ntBASIC8.01□□□□□ -1.13
LRCH3Q96II8 SNORA7A-201ENST00000384765 139 ntBASIC8.01□□□□□ -1.13
LRCH3Q96II8 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
LRCH3Q96II8 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 RNA5SP431-201ENST00000410312 120 ntBASIC8.01□□□□□ -1.13
LRCH3Q96II8 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
LRCH3Q96II8 AL160004.2-201ENST00000432935 350 ntBASIC8.01□□□□□ -1.13
LRCH3Q96II8 AC128677.1-201ENST00000436016 442 ntBASIC8.01□□□□□ -1.13
LRCH3Q96II8 H2AFZP6-201ENST00000444403 394 ntBASIC8.01□□□□□ -1.13
LRCH3Q96II8 AC234771.2-201ENST00000445718 597 ntBASIC8.01□□□□□ -1.13
LRCH3Q96II8 AC108693.1-201ENST00000496068 432 ntBASIC8.01□□□□□ -1.13
LRCH3Q96II8 EIF4EP3-201ENST00000498782 656 ntBASIC8.01□□□□□ -1.13
LRCH3Q96II8 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
LRCH3Q96II8 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
LRCH3Q96II8 HMGB3P17-201ENST00000504195 649 ntBASIC8.01□□□□□ -1.13
LRCH3Q96II8 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
LRCH3Q96II8 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
LRCH3Q96II8 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 AL137100.2-201ENST00000555786 315 ntBASIC8.01□□□□□ -1.13
LRCH3Q96II8 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 AC097641.3-201ENST00000613523 464 ntBASIC8.01□□□□□ -1.13
LRCH3Q96II8 MIR6886-201ENST00000619864 61 ntBASIC8.01□□□□□ -1.13
LRCH3Q96II8 AC026336.5-201ENST00000624455 738 ntBASIC8.01□□□□□ -1.13
LRCH3Q96II8 CASC19-232ENST00000641480 1244 ntBASIC8.01□□□□□ -1.13
LRCH3Q96II8 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
LRCH3Q96II8 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
LRCH3Q96II8 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 FANCD2P2-201ENST00000437591 1400 ntBASIC8.01□□□□□ -1.13
LRCH3Q96II8 AC007485.2-201ENST00000623493 1667 ntBASIC8.01□□□□□ -1.13
LRCH3Q96II8 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
LRCH3Q96II8 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 LINC02128-205ENST00000641755 1334 ntBASIC8.01□□□□□ -1.13
LRCH3Q96II8 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
LRCH3Q96II8 SOX6-210ENST00000528252 2707 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 HSP90AB7P-201ENST00000450068 2454 ntBASIC8.01□□□□□ -1.13
LRCH3Q96II8 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
LRCH3Q96II8 OR7E25P-202ENST00000641088 5937 ntBASIC8.01□□□□□ -1.13
LRCH3Q96II8 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC8□□□□□ -1.13
LRCH3Q96II8 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
LRCH3Q96II8 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
LRCH3Q96II8 AC090771.1-201ENST00000585803 1618 ntBASIC8□□□□□ -1.13
LRCH3Q96II8 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC8□□□□□ -1.13
LRCH3Q96II8 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC8□□□□□ -1.13
LRCH3Q96II8 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC8□□□□□ -1.13
LRCH3Q96II8 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC8□□□□□ -1.13
LRCH3Q96II8 AC026464.2-201ENST00000567834 2421 ntBASIC8□□□□□ -1.13
LRCH3Q96II8 HSP90AA2P-201ENST00000530115 2196 ntBASIC8□□□□□ -1.13
LRCH3Q96II8 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
LRCH3Q96II8 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
LRCH3Q96II8 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
LRCH3Q96II8 AL136146.1-201ENST00000529830 1667 ntBASIC8□□□□□ -1.13
LRCH3Q96II8 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC8□□□□□ -1.13
LRCH3Q96II8 NRK-204ENST00000540278 1687 ntTSL 2 BASIC8□□□□□ -1.13
LRCH3Q96II8 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
LRCH3Q96II8 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
LRCH3Q96II8 RNU6-1066P-201ENST00000363573 105 ntBASIC8□□□□□ -1.13
LRCH3Q96II8 RNU6-456P-201ENST00000384493 107 ntBASIC8□□□□□ -1.13
LRCH3Q96II8 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC8□□□□□ -1.13
LRCH3Q96II8 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
LRCH3Q96II8 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC8□□□□□ -1.13
LRCH3Q96II8 BCRP8-201ENST00000412037 255 ntBASIC8□□□□□ -1.13
LRCH3Q96II8 HSPE1P1-201ENST00000421494 318 ntBASIC8□□□□□ -1.13
LRCH3Q96II8 DUTP6-201ENST00000425573 462 ntBASIC8□□□□□ -1.13
LRCH3Q96II8 AP001324.1-201ENST00000428553 399 ntBASIC8□□□□□ -1.13
LRCH3Q96II8 BRWD1P3-201ENST00000428816 390 ntBASIC8□□□□□ -1.13
LRCH3Q96II8 RPS29P14-201ENST00000431518 171 ntBASIC8□□□□□ -1.13
LRCH3Q96II8 USP24P1-201ENST00000433802 779 ntBASIC8□□□□□ -1.13
LRCH3Q96II8 RPL23AP50-201ENST00000434149 455 ntBASIC8□□□□□ -1.13
LRCH3Q96II8 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC8□□□□□ -1.13
LRCH3Q96II8 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC8□□□□□ -1.13
LRCH3Q96II8 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC8□□□□□ -1.13
LRCH3Q96II8 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC8□□□□□ -1.13
LRCH3Q96II8 RPL26P28-201ENST00000451325 435 ntBASIC8□□□□□ -1.13
LRCH3Q96II8 BTF3P5-201ENST00000457252 467 ntBASIC8□□□□□ -1.13
LRCH3Q96II8 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC8□□□□□ -1.13
LRCH3Q96II8 GTF2IP11-201ENST00000526931 420 ntBASIC8□□□□□ -1.13
LRCH3Q96II8 AP003181.2-201ENST00000528941 181 ntBASIC8□□□□□ -1.13
LRCH3Q96II8 TRAV15-201ENST00000556680 249 ntBASIC8□□□□□ -1.13
LRCH3Q96II8 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC8□□□□□ -1.13
LRCH3Q96II8 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms