Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC38Q502W7 RNU1-150P-201ENST00000362491 162 ntBASIC5.76□□□□□ -1.49
CCDC38Q502W7 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 SUGT1P2-201ENST00000379452 992 ntBASIC5.76□□□□□ -1.49
CCDC38Q502W7 MIR1203-201ENST00000408812 85 ntBASIC5.76□□□□□ -1.49
CCDC38Q502W7 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.76□□□□□ -1.49
CCDC38Q502W7 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 AC113412.1-201ENST00000425840 504 ntBASIC5.76□□□□□ -1.49
CCDC38Q502W7 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 AL358876.1-201ENST00000453364 1075 ntBASIC5.76□□□□□ -1.49
CCDC38Q502W7 RPL7AP52-201ENST00000458096 790 ntBASIC5.76□□□□□ -1.49
CCDC38Q502W7 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC38Q502W7 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 IGLV3-24-201ENST00000517477 197 ntBASIC5.76□□□□□ -1.49
CCDC38Q502W7 OR5AK3P-201ENST00000527486 1297 ntBASIC5.76□□□□□ -1.49
CCDC38Q502W7 HMGN2P36-201ENST00000529541 409 ntBASIC5.76□□□□□ -1.49
CCDC38Q502W7 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC38Q502W7 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 AL390334.1-201ENST00000556395 450 ntBASIC5.76□□□□□ -1.49
CCDC38Q502W7 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 MIR4260-201ENST00000583107 67 ntBASIC5.76□□□□□ -1.49
CCDC38Q502W7 OR1AB1P-201ENST00000585564 761 ntBASIC5.76□□□□□ -1.49
CCDC38Q502W7 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC38Q502W7 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 TMEM30CP-203ENST00000637814 1035 ntBASIC5.76□□□□□ -1.49
CCDC38Q502W7 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC38Q502W7 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC38Q502W7 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC38Q502W7 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC38Q502W7 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC38Q502W7 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC38Q502W7 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC38Q502W7 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC38Q502W7 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC38Q502W7 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC38Q502W7 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC38Q502W7 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC38Q502W7 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC38Q502W7 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC38Q502W7 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 AL159987.1-201ENST00000347911 293 ntBASIC5.75□□□□□ -1.49
CCDC38Q502W7 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC38Q502W7 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC38Q502W7 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 HMGB3P31-201ENST00000413333 595 ntBASIC5.75□□□□□ -1.49
CCDC38Q502W7 VTA1P1-201ENST00000414044 866 ntBASIC5.75□□□□□ -1.49
CCDC38Q502W7 TCEA1P4-201ENST00000415066 844 ntBASIC5.75□□□□□ -1.49
CCDC38Q502W7 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 DEFB130D-201ENST00000426866 237 ntBASIC5.75□□□□□ -1.49
CCDC38Q502W7 FO393414.1-201ENST00000428697 1184 ntBASIC5.75□□□□□ -1.49
CCDC38Q502W7 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 NXT1P1-201ENST00000458481 316 ntBASIC5.75□□□□□ -1.49
CCDC38Q502W7 ACA64.1-201ENST00000459171 127 ntBASIC5.75□□□□□ -1.49
CCDC38Q502W7 RN7SL570P-201ENST00000484405 292 ntBASIC5.75□□□□□ -1.49
CCDC38Q502W7 AC009120.1-201ENST00000493458 473 ntBASIC5.75□□□□□ -1.49
CCDC38Q502W7 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC38Q502W7 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 RN7SKP253-201ENST00000516424 309 ntBASIC5.75□□□□□ -1.49
CCDC38Q502W7 SCARNA6.1-201ENST00000516989 238 ntBASIC5.75□□□□□ -1.49
CCDC38Q502W7 SEPT10P1-201ENST00000517342 1162 ntBASIC5.75□□□□□ -1.49
CCDC38Q502W7 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 AC127381.1-201ENST00000555979 939 ntBASIC5.75□□□□□ -1.49
CCDC38Q502W7 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 MIR4310-201ENST00000582950 57 ntBASIC5.75□□□□□ -1.49
CCDC38Q502W7 AC008507.2-201ENST00000588402 1176 ntBASIC5.75□□□□□ -1.49
CCDC38Q502W7 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC38Q502W7 AC104623.2-202ENST00000623477 4002 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms