Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
GABREP78334 MIR130B-202ENST00000385018 82 ntBASIC6.11□□□□□ -1.43
GABREP78334 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
GABREP78334 MIR541-201ENST00000401360 84 ntBASIC6.11□□□□□ -1.43
GABREP78334 AL031577.2-201ENST00000404133 280 ntBASIC6.11□□□□□ -1.43
GABREP78334 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GABREP78334 RNU6-648P-201ENST00000410190 107 ntBASIC6.11□□□□□ -1.43
GABREP78334 RNA5SP178-201ENST00000410380 128 ntBASIC6.11□□□□□ -1.43
GABREP78334 RN7SKP144-201ENST00000411108 279 ntBASIC6.11□□□□□ -1.43
GABREP78334 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.11□□□□□ -1.43
GABREP78334 NPM1P22-201ENST00000427761 952 ntBASIC6.11□□□□□ -1.43
GABREP78334 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.11□□□□□ -1.43
GABREP78334 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC6.11□□□□□ -1.43
GABREP78334 MUPP-201ENST00000438111 566 ntBASIC6.11□□□□□ -1.43
GABREP78334 PPIAP17-201ENST00000438507 471 ntBASIC6.11□□□□□ -1.43
GABREP78334 NPM1P33-201ENST00000438918 872 ntBASIC6.11□□□□□ -1.43
GABREP78334 TAF9P1-201ENST00000445421 515 ntBASIC6.11□□□□□ -1.43
GABREP78334 PPIAP7-201ENST00000454070 489 ntBASIC6.11□□□□□ -1.43
GABREP78334 TAF9P2-201ENST00000454958 515 ntBASIC6.11□□□□□ -1.43
GABREP78334 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.11□□□□□ -1.43
GABREP78334 PNPLA4P1-201ENST00000458328 305 ntBASIC6.11□□□□□ -1.43
GABREP78334 AC007998.1-201ENST00000474156 672 ntBASIC6.11□□□□□ -1.43
GABREP78334 NCOR1P1-202ENST00000486162 291 ntBASIC6.11□□□□□ -1.43
GABREP78334 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.11□□□□□ -1.43
GABREP78334 DSTNP2-201ENST00000504533 515 ntBASIC6.11□□□□□ -1.43
GABREP78334 AC005178.1-201ENST00000508392 440 ntBASIC6.11□□□□□ -1.43
GABREP78334 AC106800.2-201ENST00000514009 1103 ntBASIC6.11□□□□□ -1.43
GABREP78334 SNORD46.2-201ENST00000516021 102 ntBASIC6.11□□□□□ -1.43
GABREP78334 AC020937.1-201ENST00000519677 1013 ntBASIC6.11□□□□□ -1.43
GABREP78334 AC138832.1-201ENST00000522871 556 ntBASIC6.11□□□□□ -1.43
GABREP78334 AP000620.1-201ENST00000527147 504 ntBASIC6.11□□□□□ -1.43
GABREP78334 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.11□□□□□ -1.43
GABREP78334 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC6.11□□□□□ -1.43
GABREP78334 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC6.11□□□□□ -1.43
GABREP78334 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.11□□□□□ -1.43
GABREP78334 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
GABREP78334 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.11□□□□□ -1.43
GABREP78334 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.11□□□□□ -1.43
GABREP78334 AC012435.1-202ENST00000568772 240 ntBASIC6.11□□□□□ -1.43
GABREP78334 SNORA70D-201ENST00000578836 135 ntBASIC6.11□□□□□ -1.43
GABREP78334 AC090312.2-201ENST00000582687 378 ntBASIC6.11□□□□□ -1.43
GABREP78334 AP003973.1-201ENST00000604639 691 ntBASIC6.11□□□□□ -1.43
GABREP78334 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.11□□□□□ -1.43
GABREP78334 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.11□□□□□ -1.43
GABREP78334 AL133243.1-201ENST00000614487 366 ntBASIC6.11□□□□□ -1.43
GABREP78334 MIR7973-1-201ENST00000614683 76 ntBASIC6.11□□□□□ -1.43
GABREP78334 AC023509.5-201ENST00000617434 807 ntBASIC6.11□□□□□ -1.43
GABREP78334 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.11□□□□□ -1.43
GABREP78334 OR7E91P-202ENST00000642062 1198 ntBASIC6.11□□□□□ -1.43
GABREP78334 AC093278.2-201ENST00000564956 2485 ntBASIC6.11□□□□□ -1.43
GABREP78334 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.11□□□□□ -1.43
GABREP78334 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
GABREP78334 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.11□□□□□ -1.43
GABREP78334 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.11□□□□□ -1.43
GABREP78334 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.11□□□□□ -1.43
GABREP78334 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.11□□□□□ -1.43
GABREP78334 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
GABREP78334 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
GABREP78334 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
GABREP78334 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
GABREP78334 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GABREP78334 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GABREP78334 AL034546.1-201ENST00000623740 3693 ntBASIC6.11□□□□□ -1.43
GABREP78334 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.11□□□□□ -1.43
GABREP78334 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
GABREP78334 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GABREP78334 AP005139.1-201ENST00000580702 1647 ntBASIC6.1□□□□□ -1.43
GABREP78334 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
GABREP78334 RLIMP2-201ENST00000427891 1563 ntBASIC6.1□□□□□ -1.43
GABREP78334 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
GABREP78334 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.1□□□□□ -1.43
GABREP78334 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
GABREP78334 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
GABREP78334 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC6.1□□□□□ -1.43
GABREP78334 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.1□□□□□ -1.43
GABREP78334 AC125238.2-201ENST00000430003 1440 ntBASIC6.1□□□□□ -1.43
GABREP78334 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.1□□□□□ -1.43
GABREP78334 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
GABREP78334 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
GABREP78334 AC119674.1-204ENST00000641348 1343 ntBASIC6.1□□□□□ -1.43
GABREP78334 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
GABREP78334 RNA5SP284-201ENST00000384547 118 ntBASIC6.1□□□□□ -1.43
GABREP78334 HMGB3P7-201ENST00000400214 611 ntBASIC6.1□□□□□ -1.43
GABREP78334 AL590290.1-201ENST00000405336 380 ntBASIC6.1□□□□□ -1.43
GABREP78334 RNU4-64P-201ENST00000410795 131 ntBASIC6.1□□□□□ -1.43
GABREP78334 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC6.1□□□□□ -1.43
GABREP78334 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC6.1□□□□□ -1.43
GABREP78334 AC019050.1-201ENST00000418508 492 ntBASIC6.1□□□□□ -1.43
GABREP78334 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.1□□□□□ -1.43
GABREP78334 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC6.1□□□□□ -1.43
GABREP78334 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC6.1□□□□□ -1.43
GABREP78334 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.1□□□□□ -1.43
GABREP78334 ANKRD30BP3-201ENST00000444850 1070 ntBASIC6.1□□□□□ -1.43
GABREP78334 TPTE2P6-202ENST00000445572 1007 ntBASIC6.1□□□□□ -1.43
GABREP78334 AL590004.3-202ENST00000445883 451 ntBASIC6.1□□□□□ -1.43
GABREP78334 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.1□□□□□ -1.43
GABREP78334 ACA64.1-201ENST00000459171 127 ntBASIC6.1□□□□□ -1.43
GABREP78334 RN7SL369P-201ENST00000477138 299 ntBASIC6.1□□□□□ -1.43
GABREP78334 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
GABREP78334 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms