Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.9□□□□□ -1.46
NUP98P52948 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
NUP98P52948 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.9□□□□□ -1.46
NUP98P52948 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.9□□□□□ -1.46
NUP98P52948 AC009963.4-201ENST00000448535 339 ntBASIC5.9□□□□□ -1.46
NUP98P52948 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NUP98P52948 AL049830.4-201ENST00000555149 351 ntBASIC5.9□□□□□ -1.46
NUP98P52948 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.9□□□□□ -1.46
NUP98P52948 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.9□□□□□ -1.46
NUP98P52948 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.9□□□□□ -1.46
NUP98P52948 AC069366.1-201ENST00000583159 838 ntBASIC5.9□□□□□ -1.46
NUP98P52948 MIR3138-201ENST00000585238 82 ntBASIC5.9□□□□□ -1.46
NUP98P52948 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.9□□□□□ -1.46
NUP98P52948 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NUP98P52948 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NUP98P52948 RAD17P1-201ENST00000418130 2042 ntBASIC5.9□□□□□ -1.47
NUP98P52948 DHX9P1-201ENST00000436565 3076 ntBASIC5.9□□□□□ -1.47
NUP98P52948 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
NUP98P52948 OR4K17-201ENST00000315543 1032 ntBASIC5.9□□□□□ -1.47
NUP98P52948 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.9□□□□□ -1.47
NUP98P52948 RPL7AP52-201ENST00000458096 790 ntBASIC5.9□□□□□ -1.47
NUP98P52948 MYL12BP2-201ENST00000503948 512 ntBASIC5.9□□□□□ -1.47
NUP98P52948 AC026402.1-201ENST00000513642 170 ntBASIC5.9□□□□□ -1.47
NUP98P52948 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
NUP98P52948 MIR3160-1-201ENST00000577972 85 ntBASIC5.9□□□□□ -1.47
NUP98P52948 AL590392.1-201ENST00000604960 446 ntBASIC5.9□□□□□ -1.47
NUP98P52948 AC012409.3-201ENST00000611343 981 ntBASIC5.9□□□□□ -1.47
NUP98P52948 AC005962.2-201ENST00000611427 652 ntBASIC5.9□□□□□ -1.47
NUP98P52948 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
NUP98P52948 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
NUP98P52948 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
NUP98P52948 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.9□□□□□ -1.47
NUP98P52948 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NUP98P52948 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
NUP98P52948 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
NUP98P52948 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NUP98P52948 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NUP98P52948 AC020656.2-201ENST00000613291 5309 ntBASIC5.89□□□□□ -1.47
NUP98P52948 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.89□□□□□ -1.47
NUP98P52948 RNU1-13P-201ENST00000384499 162 ntBASIC5.89□□□□□ -1.47
NUP98P52948 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.89□□□□□ -1.47
NUP98P52948 AL354766.1-201ENST00000423396 542 ntBASIC5.89□□□□□ -1.47
NUP98P52948 GTF2IP2-201ENST00000424290 697 ntBASIC5.89□□□□□ -1.47
NUP98P52948 AL732292.1-201ENST00000426692 226 ntBASIC5.89□□□□□ -1.47
NUP98P52948 FHP1-201ENST00000442741 703 ntBASIC5.89□□□□□ -1.47
NUP98P52948 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.89□□□□□ -1.47
NUP98P52948 MTND2P28-201ENST00000457540 1044 ntBASIC5.89□□□□□ -1.47
NUP98P52948 RPL21P126-201ENST00000470049 478 ntBASIC5.89□□□□□ -1.47
NUP98P52948 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.89□□□□□ -1.47
NUP98P52948 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.89□□□□□ -1.47
NUP98P52948 TRAV8-5-201ENST00000537369 341 ntBASIC5.89□□□□□ -1.47
NUP98P52948 CYCSP40-201ENST00000575927 294 ntBASIC5.89□□□□□ -1.47
NUP98P52948 MIR3939-201ENST00000582614 106 ntBASIC5.89□□□□□ -1.47
NUP98P52948 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.89□□□□□ -1.47
NUP98P52948 AP001029.2-203ENST00000589795 4910 ntBASIC5.89□□□□□ -1.47
NUP98P52948 AC120338.1-201ENST00000625074 1541 ntBASIC5.89□□□□□ -1.47
NUP98P52948 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NUP98P52948 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.89□□□□□ -1.47
NUP98P52948 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NUP98P52948 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
NUP98P52948 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
NUP98P52948 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
NUP98P52948 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
NUP98P52948 AL356967.1-201ENST00000406305 431 ntBASIC5.88□□□□□ -1.47
NUP98P52948 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.88□□□□□ -1.47
NUP98P52948 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.88□□□□□ -1.47
NUP98P52948 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP98P52948 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.88□□□□□ -1.47
NUP98P52948 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP98P52948 MRPL35P2-201ENST00000448009 511 ntBASIC5.88□□□□□ -1.47
NUP98P52948 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.88□□□□□ -1.47
NUP98P52948 AC093166.2-201ENST00000455969 1017 ntBASIC5.88□□□□□ -1.47
NUP98P52948 AC021660.1-201ENST00000465006 554 ntBASIC5.88□□□□□ -1.47
NUP98P52948 GTF2IP11-201ENST00000526931 420 ntBASIC5.88□□□□□ -1.47
NUP98P52948 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.88□□□□□ -1.47
NUP98P52948 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP98P52948 AC010857.1-201ENST00000606398 594 ntBASIC5.88□□□□□ -1.47
NUP98P52948 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
NUP98P52948 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP98P52948 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NUP98P52948 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP98P52948 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NUP98P52948 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NUP98P52948 AC133552.1-201ENST00000569988 4007 ntBASIC5.88□□□□□ -1.47
NUP98P52948 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NUP98P52948 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP98P52948 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.88□□□□□ -1.47
NUP98P52948 AC091046.3-201ENST00000631455 1574 ntBASIC5.88□□□□□ -1.47
NUP98P52948 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NUP98P52948 SNORA57.1-201ENST00000391227 145 ntBASIC5.88□□□□□ -1.47
NUP98P52948 AC007738.1-201ENST00000413892 348 ntBASIC5.88□□□□□ -1.47
NUP98P52948 E2F6P2-201ENST00000420708 748 ntBASIC5.88□□□□□ -1.47
NUP98P52948 SCARNA10-201ENST00000459255 330 ntBASIC5.88□□□□□ -1.47
NUP98P52948 RPL7AP10-201ENST00000481016 791 ntBASIC5.88□□□□□ -1.47
NUP98P52948 MTND4LP2-201ENST00000502312 285 ntBASIC5.88□□□□□ -1.47
NUP98P52948 RNA5SP116-201ENST00000516132 98 ntBASIC5.88□□□□□ -1.47
NUP98P52948 AC020937.1-201ENST00000519677 1013 ntBASIC5.88□□□□□ -1.47
NUP98P52948 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.88□□□□□ -1.47
NUP98P52948 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.88□□□□□ -1.47
NUP98P52948 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms