Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.24□□□□□ -1.57
TNFSF9P41273 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.24□□□□□ -1.57
TNFSF9P41273 OR1H1P-201ENST00000448731 937 ntBASIC5.24□□□□□ -1.57
TNFSF9P41273 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.24□□□□□ -1.57
TNFSF9P41273 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.24□□□□□ -1.57
TNFSF9P41273 RN7SKP276-201ENST00000516242 268 ntBASIC5.24□□□□□ -1.57
TNFSF9P41273 RNU6-709P-201ENST00000517257 104 ntBASIC5.24□□□□□ -1.57
TNFSF9P41273 HNRNPRP2-201ENST00000528421 743 ntBASIC5.24□□□□□ -1.57
TNFSF9P41273 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
TNFSF9P41273 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.24□□□□□ -1.57
TNFSF9P41273 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.24□□□□□ -1.57
TNFSF9P41273 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.24□□□□□ -1.57
TNFSF9P41273 RN7SL802P-201ENST00000577858 299 ntBASIC5.24□□□□□ -1.57
TNFSF9P41273 SNORA74C-1-201ENST00000580726 201 ntBASIC5.24□□□□□ -1.57
TNFSF9P41273 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.24□□□□□ -1.57
TNFSF9P41273 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.24□□□□□ -1.57
TNFSF9P41273 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TNFSF9P41273 AC087283.1-201ENST00000604029 1074 ntBASIC5.24□□□□□ -1.57
TNFSF9P41273 AL391358.1-201ENST00000605342 190 ntBASIC5.24□□□□□ -1.57
TNFSF9P41273 AL121932.1-201ENST00000605542 214 ntBASIC5.24□□□□□ -1.57
TNFSF9P41273 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.24□□□□□ -1.57
TNFSF9P41273 HSPA8P14-201ENST00000552265 1805 ntBASIC5.24□□□□□ -1.57
TNFSF9P41273 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.24□□□□□ -1.57
TNFSF9P41273 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.24□□□□□ -1.57
TNFSF9P41273 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
TNFSF9P41273 TLK1P1-201ENST00000456760 2440 ntBASIC5.24□□□□□ -1.57
TNFSF9P41273 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.24□□□□□ -1.57
TNFSF9P41273 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.24□□□□□ -1.57
TNFSF9P41273 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF9P41273 AC010928.1-201ENST00000592477 1447 ntBASIC5.23□□□□□ -1.57
TNFSF9P41273 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TNFSF9P41273 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TNFSF9P41273 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TNFSF9P41273 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TNFSF9P41273 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.23□□□□□ -1.57
TNFSF9P41273 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.23□□□□□ -1.57
TNFSF9P41273 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TNFSF9P41273 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TNFSF9P41273 CYB5AP4-201ENST00000396692 399 ntBASIC5.23□□□□□ -1.57
TNFSF9P41273 AC114755.2-201ENST00000413520 361 ntBASIC5.23□□□□□ -1.57
TNFSF9P41273 RPL26P29-201ENST00000415623 438 ntBASIC5.23□□□□□ -1.57
TNFSF9P41273 USP9YP9-201ENST00000429406 715 ntBASIC5.23□□□□□ -1.57
TNFSF9P41273 NRBF2P3-201ENST00000432731 865 ntBASIC5.23□□□□□ -1.57
TNFSF9P41273 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.23□□□□□ -1.57
TNFSF9P41273 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.23□□□□□ -1.57
TNFSF9P41273 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.23□□□□□ -1.57
TNFSF9P41273 SNRPCP3-201ENST00000474888 476 ntBASIC5.23□□□□□ -1.57
TNFSF9P41273 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.23□□□□□ -1.57
TNFSF9P41273 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.23□□□□□ -1.57
TNFSF9P41273 AC112184.1-201ENST00000505179 312 ntBASIC5.23□□□□□ -1.57
TNFSF9P41273 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.23□□□□□ -1.57
TNFSF9P41273 AC091868.1-201ENST00000508746 304 ntBASIC5.23□□□□□ -1.57
TNFSF9P41273 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.23□□□□□ -1.57
TNFSF9P41273 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.23□□□□□ -1.57
TNFSF9P41273 AC133555.2-201ENST00000550213 292 ntBASIC5.23□□□□□ -1.57
TNFSF9P41273 HMGN2P47-201ENST00000559378 272 ntBASIC5.23□□□□□ -1.57
TNFSF9P41273 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.23□□□□□ -1.57
TNFSF9P41273 MIR5699-201ENST00000578903 90 ntBASIC5.23□□□□□ -1.57
TNFSF9P41273 AC091042.1-201ENST00000579213 173 ntBASIC5.23□□□□□ -1.57
TNFSF9P41273 AL512782.1-201ENST00000603093 364 ntBASIC5.23□□□□□ -1.57
TNFSF9P41273 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.23□□□□□ -1.57
TNFSF9P41273 MIR7703-201ENST00000620784 77 ntBASIC5.23□□□□□ -1.57
TNFSF9P41273 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TNFSF9P41273 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.23□□□□□ -1.57
TNFSF9P41273 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
TNFSF9P41273 SDAD1P1-202ENST00000524156 2051 ntBASIC5.23□□□□□ -1.57
TNFSF9P41273 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.23□□□□□ -1.57
TNFSF9P41273 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TNFSF9P41273 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TNFSF9P41273 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TNFSF9P41273 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TNFSF9P41273 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TNFSF9P41273 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TNFSF9P41273 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TNFSF9P41273 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.22□□□□□ -1.57
TNFSF9P41273 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
TNFSF9P41273 AC083843.2-201ENST00000568248 6253 ntBASIC5.22□□□□□ -1.57
TNFSF9P41273 SOCS5P3-201ENST00000425115 1576 ntBASIC5.22□□□□□ -1.57
TNFSF9P41273 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TNFSF9P41273 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TNFSF9P41273 RNVU1-6-201ENST00000364688 164 ntBASIC5.22□□□□□ -1.57
TNFSF9P41273 RNU6-673P-201ENST00000365084 104 ntBASIC5.22□□□□□ -1.57
TNFSF9P41273 AC136624.1-201ENST00000400791 413 ntBASIC5.22□□□□□ -1.57
TNFSF9P41273 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.22□□□□□ -1.57
TNFSF9P41273 AC007738.1-201ENST00000413892 348 ntBASIC5.22□□□□□ -1.57
TNFSF9P41273 LINC00993-201ENST00000420453 540 ntBASIC5.22□□□□□ -1.57
TNFSF9P41273 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.22□□□□□ -1.57
TNFSF9P41273 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.22□□□□□ -1.57
TNFSF9P41273 RPS17P8-201ENST00000434525 335 ntBASIC5.22□□□□□ -1.57
TNFSF9P41273 AC005154.2-201ENST00000438110 379 ntBASIC5.22□□□□□ -1.57
TNFSF9P41273 BTF3P6-201ENST00000448054 499 ntBASIC5.22□□□□□ -1.57
TNFSF9P41273 RPS29P22-201ENST00000472363 168 ntBASIC5.22□□□□□ -1.57
TNFSF9P41273 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.22□□□□□ -1.57
TNFSF9P41273 SCARNA22-201ENST00000503991 125 ntBASIC5.22□□□□□ -1.57
TNFSF9P41273 AC138409.2-202ENST00000507274 458 ntBASIC5.22□□□□□ -1.57
TNFSF9P41273 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TNFSF9P41273 SOX5P1-201ENST00000524155 1127 ntBASIC5.22□□□□□ -1.57
TNFSF9P41273 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.22□□□□□ -1.57
TNFSF9P41273 AL049830.4-201ENST00000555149 351 ntBASIC5.22□□□□□ -1.57
TNFSF9P41273 AL359219.2-201ENST00000555184 348 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms