Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.64□□□□□ -1.67
SFTPBP07988 HMGN1P9-201ENST00000515212 298 ntBASIC4.64□□□□□ -1.67
SFTPBP07988 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.64□□□□□ -1.67
SFTPBP07988 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.64□□□□□ -1.67
SFTPBP07988 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.64□□□□□ -1.67
SFTPBP07988 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SFTPBP07988 AC127381.1-201ENST00000555979 939 ntBASIC4.64□□□□□ -1.67
SFTPBP07988 AL390334.1-201ENST00000556395 450 ntBASIC4.64□□□□□ -1.67
SFTPBP07988 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.64□□□□□ -1.67
SFTPBP07988 AC106730.2-201ENST00000566641 540 ntBASIC4.64□□□□□ -1.67
SFTPBP07988 MRPS21P7-201ENST00000566937 238 ntBASIC4.64□□□□□ -1.67
SFTPBP07988 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SFTPBP07988 MIR4489-201ENST00000578869 62 ntBASIC4.64□□□□□ -1.67
SFTPBP07988 AC127024.5-201ENST00000580085 462 ntBASIC4.64□□□□□ -1.67
SFTPBP07988 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.64□□□□□ -1.67
SFTPBP07988 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.64□□□□□ -1.67
SFTPBP07988 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.64□□□□□ -1.67
SFTPBP07988 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.64□□□□□ -1.67
SFTPBP07988 AC124856.1-201ENST00000600819 896 ntBASIC4.64□□□□□ -1.67
SFTPBP07988 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.64□□□□□ -1.67
SFTPBP07988 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.64□□□□□ -1.67
SFTPBP07988 AC242628.1-201ENST00000606810 391 ntBASIC4.64□□□□□ -1.67
SFTPBP07988 AC012557.1-201ENST00000607115 611 ntBASIC4.64□□□□□ -1.67
SFTPBP07988 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SFTPBP07988 AC079395.2-201ENST00000610982 737 ntBASIC4.64□□□□□ -1.67
SFTPBP07988 SDR42E1P1-201ENST00000611327 477 ntBASIC4.64□□□□□ -1.67
SFTPBP07988 AL512624.1-201ENST00000613638 469 ntBASIC4.64□□□□□ -1.67
SFTPBP07988 AC007683.2-201ENST00000624681 714 ntBASIC4.64□□□□□ -1.67
SFTPBP07988 AL163152.1-201ENST00000642001 374 ntBASIC4.64□□□□□ -1.67
SFTPBP07988 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SFTPBP07988 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
SFTPBP07988 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SFTPBP07988 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
SFTPBP07988 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SFTPBP07988 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SFTPBP07988 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SFTPBP07988 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SFTPBP07988 AC025574.1-201ENST00000554784 1653 ntBASIC4.64□□□□□ -1.67
SFTPBP07988 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SFTPBP07988 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SFTPBP07988 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.63□□□□□ -1.67
SFTPBP07988 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SFTPBP07988 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SFTPBP07988 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SFTPBP07988 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.63□□□□□ -1.67
SFTPBP07988 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SFTPBP07988 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SFTPBP07988 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SFTPBP07988 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SFTPBP07988 RN7SKP6-201ENST00000364795 319 ntBASIC4.63□□□□□ -1.67
SFTPBP07988 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SFTPBP07988 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SFTPBP07988 AC233289.1-201ENST00000403700 508 ntBASIC4.63□□□□□ -1.67
SFTPBP07988 AL391361.1-201ENST00000405580 489 ntBASIC4.63□□□□□ -1.67
SFTPBP07988 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.63□□□□□ -1.67
SFTPBP07988 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.63□□□□□ -1.67
SFTPBP07988 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SFTPBP07988 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.63□□□□□ -1.67
SFTPBP07988 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.63□□□□□ -1.67
SFTPBP07988 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.63□□□□□ -1.67
SFTPBP07988 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.63□□□□□ -1.67
SFTPBP07988 MTND5P8-201ENST00000449817 1083 ntBASIC4.63□□□□□ -1.67
SFTPBP07988 LDHBP2-201ENST00000456969 1005 ntBASIC4.63□□□□□ -1.67
SFTPBP07988 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.63□□□□□ -1.67
SFTPBP07988 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.63□□□□□ -1.67
SFTPBP07988 AC020779.1-201ENST00000478757 796 ntBASIC4.63□□□□□ -1.67
SFTPBP07988 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.63□□□□□ -1.67
SFTPBP07988 SUMO1P1-201ENST00000497904 306 ntBASIC4.63□□□□□ -1.67
SFTPBP07988 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.63□□□□□ -1.67
SFTPBP07988 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.63□□□□□ -1.67
SFTPBP07988 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.63□□□□□ -1.67
SFTPBP07988 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.63□□□□□ -1.67
SFTPBP07988 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.63□□□□□ -1.67
SFTPBP07988 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.63□□□□□ -1.67
SFTPBP07988 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.63□□□□□ -1.67
SFTPBP07988 OR8G3P-201ENST00000533406 921 ntBASIC4.63□□□□□ -1.67
SFTPBP07988 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.63□□□□□ -1.67
SFTPBP07988 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.63□□□□□ -1.67
SFTPBP07988 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.63□□□□□ -1.67
SFTPBP07988 AC016180.1-201ENST00000567945 403 ntBASIC4.63□□□□□ -1.67
SFTPBP07988 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.63□□□□□ -1.67
SFTPBP07988 MIR3936-201ENST00000584304 110 ntBASIC4.63□□□□□ -1.67
SFTPBP07988 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SFTPBP07988 PPATP2-201ENST00000605635 508 ntBASIC4.63□□□□□ -1.67
SFTPBP07988 AL021368.1-201ENST00000607490 540 ntBASIC4.63□□□□□ -1.67
SFTPBP07988 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.63□□□□□ -1.67
SFTPBP07988 AL122125.1-201ENST00000616999 600 ntBASIC4.63□□□□□ -1.67
SFTPBP07988 AC091932.2-201ENST00000623014 291 ntBASIC4.63□□□□□ -1.67
SFTPBP07988 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.63□□□□□ -1.67
SFTPBP07988 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SFTPBP07988 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SFTPBP07988 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SFTPBP07988 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SFTPBP07988 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
SFTPBP07988 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.63□□□□□ -1.67
SFTPBP07988 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SFTPBP07988 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SFTPBP07988 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SFTPBP07988 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SFTPBP07988 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms