Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AL136116.2-201ENST00000404020 785 ntBASIC8.45□□□□□ -1.06
CUX2O14529 RPL7AP25-201ENST00000423357 805 ntBASIC8.45□□□□□ -1.06
CUX2O14529 GCA-203ENST00000429691 824 ntTSL 3 BASIC8.45□□□□□ -1.06
CUX2O14529 RPS29P9-201ENST00000440360 171 ntBASIC8.45□□□□□ -1.06
CUX2O14529 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC8.45□□□□□ -1.06
CUX2O14529 AC079804.1-201ENST00000461922 436 ntBASIC8.45□□□□□ -1.06
CUX2O14529 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC8.45□□□□□ -1.06
CUX2O14529 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC8.45□□□□□ -1.06
CUX2O14529 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CUX2O14529 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC8.45□□□□□ -1.06
CUX2O14529 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC8.45□□□□□ -1.06
CUX2O14529 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CUX2O14529 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC8.45□□□□□ -1.06
CUX2O14529 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC8.45□□□□□ -1.06
CUX2O14529 LDHAL6CP-202ENST00000550738 3224 ntBASIC8.45□□□□□ -1.06
CUX2O14529 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
CUX2O14529 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
CUX2O14529 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CUX2O14529 AC006210.2-201ENST00000367074 1545 ntBASIC8.45□□□□□ -1.06
CUX2O14529 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
CUX2O14529 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CUX2O14529 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC8.45□□□□□ -1.06
CUX2O14529 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CUX2O14529 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CUX2O14529 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC8.45□□□□□ -1.06
CUX2O14529 AC099670.2-201ENST00000435130 321 ntBASIC8.45□□□□□ -1.06
CUX2O14529 ACTR3P2-201ENST00000439585 1257 ntBASIC8.45□□□□□ -1.06
CUX2O14529 RPS3AP12-201ENST00000443616 753 ntBASIC8.45□□□□□ -1.06
CUX2O14529 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC8.45□□□□□ -1.06
CUX2O14529 SCARNA10-201ENST00000459255 330 ntBASIC8.45□□□□□ -1.06
CUX2O14529 HMGN1P9-201ENST00000515212 298 ntBASIC8.45□□□□□ -1.06
CUX2O14529 SNORA31.9-201ENST00000516429 84 ntBASIC8.45□□□□□ -1.06
CUX2O14529 HNRNPCP4-201ENST00000571636 900 ntBASIC8.45□□□□□ -1.06
CUX2O14529 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC8.45□□□□□ -1.06
CUX2O14529 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CUX2O14529 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC8.45□□□□□ -1.06
CUX2O14529 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
CUX2O14529 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CUX2O14529 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CUX2O14529 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC8.44□□□□□ -1.06
CUX2O14529 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC8.44□□□□□ -1.06
CUX2O14529 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC8.44□□□□□ -1.06
CUX2O14529 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
CUX2O14529 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CUX2O14529 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CUX2O14529 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC8.44□□□□□ -1.06
CUX2O14529 AC079298.1-201ENST00000625026 1619 ntBASIC8.44□□□□□ -1.06
CUX2O14529 SPRR2C-201ENST00000290702 219 ntBASIC8.44□□□□□ -1.06
CUX2O14529 BOLA3P4-201ENST00000418151 400 ntBASIC8.44□□□□□ -1.06
CUX2O14529 NDUFB4P8-201ENST00000435351 367 ntBASIC8.44□□□□□ -1.06
CUX2O14529 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC8.44□□□□□ -1.06
CUX2O14529 AC091564.1-201ENST00000464563 479 ntBASIC8.44□□□□□ -1.06
CUX2O14529 AC119751.5-201ENST00000514077 770 ntBASIC8.44□□□□□ -1.06
CUX2O14529 RN7SKP83-201ENST00000516512 178 ntBASIC8.44□□□□□ -1.06
CUX2O14529 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC8.44□□□□□ -1.06
CUX2O14529 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
CUX2O14529 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC8.43□□□□□ -1.06
CUX2O14529 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CUX2O14529 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CUX2O14529 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CUX2O14529 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC8.43□□□□□ -1.06
CUX2O14529 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
CUX2O14529 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC8.43□□□□□ -1.06
CUX2O14529 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
CUX2O14529 RN7SKP177-201ENST00000410567 355 ntBASIC8.43□□□□□ -1.06
CUX2O14529 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC8.43□□□□□ -1.06
CUX2O14529 TAAR4P-201ENST00000454843 1039 ntBASIC8.43□□□□□ -1.06
CUX2O14529 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC8.43□□□□□ -1.06
CUX2O14529 IGBP1P4-201ENST00000503202 879 ntBASIC8.43□□□□□ -1.06
CUX2O14529 RNA5SP116-201ENST00000516132 98 ntBASIC8.43□□□□□ -1.06
CUX2O14529 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC8.43□□□□□ -1.06
CUX2O14529 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC8.43□□□□□ -1.06
CUX2O14529 AC069061.3-201ENST00000582254 823 ntBASIC8.43□□□□□ -1.06
CUX2O14529 uc_338.7-201ENST00000621834 124 ntBASIC8.43□□□□□ -1.06
CUX2O14529 AL356121.2-201ENST00000624715 780 ntBASIC8.43□□□□□ -1.06
CUX2O14529 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
CUX2O14529 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
CUX2O14529 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
CUX2O14529 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
CUX2O14529 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CUX2O14529 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC8.42□□□□□ -1.06
CUX2O14529 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC8.42□□□□□ -1.06
CUX2O14529 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
CUX2O14529 CDY14P-201ENST00000431260 1014 ntBASIC8.42□□□□□ -1.06
CUX2O14529 AL050321.1-201ENST00000432363 400 ntBASIC8.42□□□□□ -1.06
CUX2O14529 CDY12P-201ENST00000440679 1015 ntBASIC8.42□□□□□ -1.06
CUX2O14529 CDY13P-201ENST00000445813 1015 ntBASIC8.42□□□□□ -1.06
CUX2O14529 CDY23P-201ENST00000451661 1014 ntBASIC8.42□□□□□ -1.06
CUX2O14529 AC116562.1-201ENST00000485355 781 ntBASIC8.42□□□□□ -1.06
CUX2O14529 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC8.42□□□□□ -1.06
CUX2O14529 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC8.42□□□□□ -1.06
CUX2O14529 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC8.42□□□□□ -1.06
CUX2O14529 AC084824.2-201ENST00000548906 345 ntBASIC8.42□□□□□ -1.06
CUX2O14529 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC8.42□□□□□ -1.06
CUX2O14529 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC8.42□□□□□ -1.06
CUX2O14529 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC8.42□□□□□ -1.06
CUX2O14529 BNIP3P35-201ENST00000604530 490 ntBASIC8.42□□□□□ -1.06
CUX2O14529 BX005214.3-202ENST00000619809 325 ntBASIC8.42□□□□□ -1.06
CUX2O14529 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
CUX2O14529 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms