Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 RNA5SP105-201ENST00000391123 113 ntBASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 HMGN1P20-201ENST00000411849 300 ntBASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 VDAC1P9-201ENST00000412766 841 ntBASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 DSTNP5-201ENST00000427921 523 ntBASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 NDUFS5P5-201ENST00000437256 321 ntBASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 GAS5-218ENST00000448718 565 ntTSL 2 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 AC008410.1-201ENST00000483777 339 ntBASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 RN7SL558P-201ENST00000497468 299 ntBASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 NENFP3-201ENST00000503735 313 ntBASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 PSMA2P2-201ENST00000504319 686 ntBASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 AC025458.1-201ENST00000506046 166 ntBASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 OR5H7P-201ENST00000514084 930 ntBASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 AC125612.1-201ENST00000547580 377 ntBASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 AL512310.9-201ENST00000553311 948 ntBASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 SULT1C2P2-201ENST00000562517 294 ntBASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 DPPA2P4-201ENST00000563717 878 ntBASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 MIR8080-201ENST00000622224 89 ntBASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 SNORA11.3-201ENST00000408471 128 ntBASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 AL160275.2-201ENST00000412010 394 ntBASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 SRSF1P1-201ENST00000424058 520 ntBASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 MTND6P18-201ENST00000439477 513 ntBASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 DNAJA1P5-201ENST00000440278 943 ntBASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 RN7SL517P-201ENST00000462240 305 ntBASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 AC090568.1-201ENST00000509499 856 ntBASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 RNA5SP392-201ENST00000516905 112 ntBASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 CYCSP28-201ENST00000534284 321 ntBASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 AC090888.3-201ENST00000558917 509 ntBASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 MRPS21P7-201ENST00000566937 238 ntBASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 SLC25A36P1-201ENST00000590111 465 ntBASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 AC060766.1-201ENST00000590824 627 ntBASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 AC012616.1-201ENST00000600294 197 ntBASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 PPATP2-201ENST00000605635 508 ntBASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 AC015982.1-201ENST00000608113 465 ntBASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 AP005432.2-201ENST00000608162 586 ntBASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 SNORA11.6-201ENST00000619030 128 ntBASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 MIR1910-201ENST00000636955 80 ntBASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 OR8G3P-202ENST00000641572 1255 ntBASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 AC008691.1-209ENST00000642094 814 ntBASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
RBFOX3A6NFN3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms