Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CNTN3Q9P232 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CNTN3Q9P232 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CNTN3Q9P232 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CNTN3Q9P232 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CNTN3Q9P232 LINC01613-201ENST00000561476 2780 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CNTN3Q9P232 SNORA72.1-201ENST00000363485 129 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 RNU6-1339P-201ENST00000363574 91 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 RNU6-452P-201ENST00000384406 107 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 Y_RNA.554-201ENST00000384672 102 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 CYCSP45-201ENST00000402289 315 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 PRELID1P1-201ENST00000403549 660 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 RNU2-41P-201ENST00000410991 178 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 USP9YP6-201ENST00000413550 854 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 AL713922.1-201ENST00000416477 747 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 OR8F1P-201ENST00000425243 930 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 RWDD4P2-201ENST00000426392 563 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 AP001324.1-201ENST00000428553 399 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 RPL31P54-201ENST00000429803 370 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 GAPDHP34-201ENST00000432112 823 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 RPS25P9-201ENST00000435591 252 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 AC007383.1-201ENST00000445875 636 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 USP9YP34-201ENST00000453983 808 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 AL121769.1-201ENST00000469473 401 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 AC079080.1-201ENST00000479841 822 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 RN7SL741P-201ENST00000482473 289 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 SUMO2P4-201ENST00000504193 276 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 AC131392.1-201ENST00000506490 633 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 RNU6-1004P-201ENST00000516584 111 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 IGHV3-32-201ENST00000519182 355 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 AC135983.3-201ENST00000528049 1226 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CNTN3Q9P232 AC121758.1-202ENST00000556917 658 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 PCMTD1P2-201ENST00000565017 355 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 FGF7P1-201ENST00000582820 288 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 AC015818.6-201ENST00000584274 634 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 AC012065.4-201ENST00000602445 679 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 AC133552.5-201ENST00000604266 540 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 uc_338.29-201ENST00000615099 168 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 AC105114.1-201ENST00000624795 1862 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CNTN3Q9P232 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 SMG1P5-202ENST00000529428 4219 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 SMG1P2-201ENST00000566127 4221 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CNTN3Q9P232 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CNTN3Q9P232 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CNTN3Q9P232 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC7.08□□□□□ -1.28
CNTN3Q9P232 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CNTN3Q9P232 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CNTN3Q9P232 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CNTN3Q9P232 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CNTN3Q9P232 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.07□□□□□ -1.28
CNTN3Q9P232 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CNTN3Q9P232 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
CNTN3Q9P232 AL391261.1-201ENST00000555712 1479 ntBASIC7.07□□□□□ -1.28
CNTN3Q9P232 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CNTN3Q9P232 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
CNTN3Q9P232 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC7.07□□□□□ -1.28
CNTN3Q9P232 RN7SKP171-201ENST00000364417 303 ntBASIC7.07□□□□□ -1.28
CNTN3Q9P232 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CNTN3Q9P232 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CNTN3Q9P232 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CNTN3Q9P232 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC7.07□□□□□ -1.28
CNTN3Q9P232 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC7.07□□□□□ -1.28
CNTN3Q9P232 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC7.07□□□□□ -1.28
CNTN3Q9P232 RPL7P36-201ENST00000444633 681 ntBASIC7.07□□□□□ -1.28
CNTN3Q9P232 VN1R10P-201ENST00000447106 875 ntBASIC7.07□□□□□ -1.28
CNTN3Q9P232 AC093166.3-201ENST00000448785 303 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms