Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC011815.3-201ENST00000624194 473 ntBASIC5.26□□□□□ -1.57
BRF2Q9HAW0 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.26□□□□□ -1.57
BRF2Q9HAW0 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.26□□□□□ -1.57
BRF2Q9HAW0 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.26□□□□□ -1.57
BRF2Q9HAW0 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
BRF2Q9HAW0 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.26□□□□□ -1.57
BRF2Q9HAW0 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
BRF2Q9HAW0 AC096656.1-201ENST00000623826 1364 ntBASIC5.26□□□□□ -1.57
BRF2Q9HAW0 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
BRF2Q9HAW0 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
BRF2Q9HAW0 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 BX005019.1-201ENST00000561881 1810 ntBASIC5.25□□□□□ -1.57
BRF2Q9HAW0 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 MTCO1P18-201ENST00000455518 1419 ntBASIC5.25□□□□□ -1.57
BRF2Q9HAW0 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 AP002784.2-201ENST00000397300 549 ntBASIC5.25□□□□□ -1.57
BRF2Q9HAW0 MTND2P15-201ENST00000418575 892 ntBASIC5.25□□□□□ -1.57
BRF2Q9HAW0 VN1R37P-201ENST00000419096 748 ntBASIC5.25□□□□□ -1.57
BRF2Q9HAW0 AC048351.1-201ENST00000420064 602 ntBASIC5.25□□□□□ -1.57
BRF2Q9HAW0 AKR1B10P1-201ENST00000425765 942 ntBASIC5.25□□□□□ -1.57
BRF2Q9HAW0 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 AL645931.1-201ENST00000439737 410 ntBASIC5.25□□□□□ -1.57
BRF2Q9HAW0 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 AC002553.2-201ENST00000453217 340 ntBASIC5.25□□□□□ -1.57
BRF2Q9HAW0 HMGB1P4-201ENST00000455362 567 ntBASIC5.25□□□□□ -1.57
BRF2Q9HAW0 AC094085.1-201ENST00000468914 584 ntBASIC5.25□□□□□ -1.57
BRF2Q9HAW0 CYCSP20-201ENST00000473154 315 ntBASIC5.25□□□□□ -1.57
BRF2Q9HAW0 UBFD1P1-201ENST00000473259 814 ntBASIC5.25□□□□□ -1.57
BRF2Q9HAW0 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 AC021193.1-201ENST00000511607 420 ntBASIC5.25□□□□□ -1.57
BRF2Q9HAW0 MTCO3P27-201ENST00000514397 196 ntBASIC5.25□□□□□ -1.57
BRF2Q9HAW0 MTATP6P9-201ENST00000515039 680 ntBASIC5.25□□□□□ -1.57
BRF2Q9HAW0 AP003355.1-201ENST00000518956 587 ntBASIC5.25□□□□□ -1.57
BRF2Q9HAW0 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 AC002069.2-201ENST00000603580 883 ntBASIC5.25□□□□□ -1.57
BRF2Q9HAW0 BNIP3P35-201ENST00000604530 490 ntBASIC5.25□□□□□ -1.57
BRF2Q9HAW0 AC100767.2-201ENST00000604840 693 ntBASIC5.25□□□□□ -1.57
BRF2Q9HAW0 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.25□□□□□ -1.57
BRF2Q9HAW0 AC021851.1-201ENST00000608537 1082 ntBASIC5.25□□□□□ -1.57
BRF2Q9HAW0 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 AL365181.4-201ENST00000609800 547 ntBASIC5.25□□□□□ -1.57
BRF2Q9HAW0 uc_338.9-201ENST00000617424 182 ntBASIC5.25□□□□□ -1.57
BRF2Q9HAW0 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
BRF2Q9HAW0 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
BRF2Q9HAW0 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.24□□□□□ -1.57
BRF2Q9HAW0 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
BRF2Q9HAW0 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
BRF2Q9HAW0 AL353796.1-201ENST00000561542 3241 ntBASIC5.24□□□□□ -1.57
BRF2Q9HAW0 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.24□□□□□ -1.57
BRF2Q9HAW0 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.24□□□□□ -1.57
BRF2Q9HAW0 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.24□□□□□ -1.57
BRF2Q9HAW0 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
BRF2Q9HAW0 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
BRF2Q9HAW0 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.24□□□□□ -1.57
BRF2Q9HAW0 RNU4-2-201ENST00000365668 141 ntBASIC5.24□□□□□ -1.57
BRF2Q9HAW0 RNU6-1005P-201ENST00000384519 107 ntBASIC5.24□□□□□ -1.57
BRF2Q9HAW0 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
BRF2Q9HAW0 LYPLA1P3-201ENST00000402650 695 ntBASIC5.24□□□□□ -1.57
BRF2Q9HAW0 VTA1P1-201ENST00000414044 866 ntBASIC5.24□□□□□ -1.57
BRF2Q9HAW0 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.24□□□□□ -1.57
BRF2Q9HAW0 MTND2P9-201ENST00000422293 931 ntBASIC5.24□□□□□ -1.57
BRF2Q9HAW0 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.24□□□□□ -1.57
BRF2Q9HAW0 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.24□□□□□ -1.57
BRF2Q9HAW0 RPL7AP49-201ENST00000429522 581 ntBASIC5.24□□□□□ -1.57
BRF2Q9HAW0 RPS24P8-201ENST00000431490 402 ntBASIC5.24□□□□□ -1.57
BRF2Q9HAW0 AL591438.1-201ENST00000433508 581 ntBASIC5.24□□□□□ -1.57
BRF2Q9HAW0 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.24□□□□□ -1.57
BRF2Q9HAW0 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.24□□□□□ -1.57
BRF2Q9HAW0 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.24□□□□□ -1.57
BRF2Q9HAW0 AC243772.1-201ENST00000451620 410 ntBASIC5.24□□□□□ -1.57
BRF2Q9HAW0 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
BRF2Q9HAW0 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.24□□□□□ -1.57
BRF2Q9HAW0 FCF1P6-201ENST00000456841 595 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms