Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC006509.1-201ENST00000420788 634 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 HMGB1P45-201ENST00000435986 653 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 NANOGNBP1-201ENST00000448444 480 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 RN7SL649P-201ENST00000496974 275 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 AC074344.1-201ENST00000512823 224 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 OR4C2P-201ENST00000530855 1064 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 OR7K1P-201ENST00000546439 926 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 MRPS21P9-201ENST00000571150 257 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 AC011453.2-201ENST00000603737 729 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 MIR6889-201ENST00000613185 59 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 STMN1P1-201ENST00000617809 440 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 AC069209.1-201ENST00000619282 651 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 MIR6813-201ENST00000621638 56 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 AL596275.2-208ENST00000641192 594 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 FANCD2P2-201ENST00000437591 1400 ntBASIC6.03□□□□□ -1.44
NUP43Q8NFH3 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 SNORA4.1-201ENST00000364263 144 ntBASIC6.03□□□□□ -1.44
NUP43Q8NFH3 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 MIR551B-201ENST00000384984 96 ntBASIC6.03□□□□□ -1.44
NUP43Q8NFH3 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 MTCO1P17-201ENST00000411522 491 ntBASIC6.03□□□□□ -1.44
NUP43Q8NFH3 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 UBTFL3-201ENST00000418934 1024 ntBASIC6.03□□□□□ -1.44
NUP43Q8NFH3 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC6.03□□□□□ -1.44
NUP43Q8NFH3 USP9YP18-201ENST00000425912 695 ntBASIC6.03□□□□□ -1.44
NUP43Q8NFH3 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.03□□□□□ -1.44
NUP43Q8NFH3 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 COL11A2P1-205ENST00000441798 676 ntBASIC6.03□□□□□ -1.44
NUP43Q8NFH3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 RPS26P30-201ENST00000443431 335 ntBASIC6.03□□□□□ -1.44
NUP43Q8NFH3 COX6CP12-201ENST00000446748 202 ntBASIC6.03□□□□□ -1.44
NUP43Q8NFH3 EPS15P1-201ENST00000448836 336 ntBASIC6.03□□□□□ -1.44
NUP43Q8NFH3 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 RANP1-206ENST00000455094 651 ntBASIC6.03□□□□□ -1.44
NUP43Q8NFH3 DNAJC19P1-201ENST00000455312 319 ntBASIC6.03□□□□□ -1.44
NUP43Q8NFH3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 MTND1P16-201ENST00000465177 898 ntBASIC6.03□□□□□ -1.44
NUP43Q8NFH3 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 RN7SL790P-201ENST00000474043 298 ntBASIC6.03□□□□□ -1.44
NUP43Q8NFH3 UBTFL6-201ENST00000477929 1024 ntBASIC6.03□□□□□ -1.44
NUP43Q8NFH3 RN7SL741P-201ENST00000482473 289 ntBASIC6.03□□□□□ -1.44
NUP43Q8NFH3 AC041039.1-201ENST00000485656 536 ntBASIC6.03□□□□□ -1.44
NUP43Q8NFH3 RPS7P6-201ENST00000485777 579 ntBASIC6.03□□□□□ -1.44
NUP43Q8NFH3 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 FTH1P8-201ENST00000498161 514 ntBASIC6.03□□□□□ -1.44
NUP43Q8NFH3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 AC093870.1-201ENST00000506837 213 ntBASIC6.03□□□□□ -1.44
NUP43Q8NFH3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 AP005639.1-201ENST00000526939 192 ntBASIC6.03□□□□□ -1.44
NUP43Q8NFH3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP43Q8NFH3 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms