Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 RNA5SP433-201ENST00000364491 114 ntBASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 UBBP2-201ENST00000376781 231 ntBASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 AL133388.1-201ENST00000404509 287 ntBASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 EIF4A1P1-201ENST00000420241 934 ntBASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 RPS29P10-201ENST00000439197 166 ntBASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 AC019185.1-201ENST00000442718 389 ntBASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 EEF1B2P3-201ENST00000447718 678 ntBASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 AL445665.1-202ENST00000452436 324 ntBASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 AC104634.1-201ENST00000452720 462 ntBASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 CCDC75P1-201ENST00000469247 791 ntBASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 AK4P6-201ENST00000505168 528 ntBASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 CYCSP22-201ENST00000517555 339 ntBASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 SEC11B-201ENST00000518383 499 ntBASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 AC012400.1-201ENST00000518452 381 ntBASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 HMGB1P40-201ENST00000525121 540 ntBASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 AC027281.1-201ENST00000574178 758 ntBASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 FAM106CP-201ENST00000582212 507 ntBASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 AC233280.2-201ENST00000603917 1070 ntBASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC71LQ8N9Z2 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 MAPK10-304ENST00000641341 3984 ntBASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 MIR1275-201ENST00000408770 80 ntBASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 RNU2-50P-201ENST00000410494 143 ntBASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 HMGN1P20-201ENST00000411849 300 ntBASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 SLC20A1P1-201ENST00000413906 956 ntBASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 AC012519.1-201ENST00000424588 610 ntBASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 AL392003.1-201ENST00000434394 243 ntBASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 FMO7P-201ENST00000436045 768 ntBASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 AL138787.1-202ENST00000437804 898 ntBASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 RAB28P3-201ENST00000448325 597 ntBASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 AC118758.1-202ENST00000454719 225 ntBASIC4.25□□□□□ -1.73
CCDC71LQ8N9Z2 AC011476.1-201ENST00000466725 307 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms