Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFWD3Q6PCD5 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.24□□□□□ -1.57
RFWD3Q6PCD5 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
RFWD3Q6PCD5 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFWD3Q6PCD5 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFWD3Q6PCD5 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 RN7SKP113-201ENST00000363891 295 ntBASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 MIR550A3-201ENST00000390735 95 ntBASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 OR5M12P-201ENST00000423388 929 ntBASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 AC009238.2-201ENST00000431026 355 ntBASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 VN1R54P-201ENST00000435210 1049 ntBASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 SUMO2P1-206ENST00000445436 284 ntBASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 IGHV5-78-201ENST00000450948 295 ntBASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 SBDSP1-204ENST00000453858 737 ntBASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 RPL35AP28-201ENST00000459730 331 ntBASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 RN7SL244P-201ENST00000493405 297 ntBASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 RNA5SP43-201ENST00000516559 110 ntBASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 AC005000.1-201ENST00000536192 288 ntBASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 AC006349.1-201ENST00000555526 235 ntBASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 AC011840.5-201ENST00000582125 771 ntBASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 MEMO1P5-201ENST00000604810 406 ntBASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 AL122125.1-201ENST00000616999 600 ntBASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 AL445528.2-201ENST00000620582 470 ntBASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 AC091905.4-201ENST00000623432 202 ntBASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 AL353662.3-201ENST00000625131 237 ntBASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 AC112255.1-201ENST00000624070 2493 ntBASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.23□□□□□ -1.57
RFWD3Q6PCD5 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 INTS6P1-201ENST00000504674 2530 ntBASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 RN7SKP95-201ENST00000362860 303 ntBASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 AL078599.1-201ENST00000402075 293 ntBASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 AL035079.1-201ENST00000405210 287 ntBASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 OR2AH1P-201ENST00000425717 928 ntBASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 GTF3AP5-201ENST00000442645 697 ntBASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 TCEA1P1-201ENST00000449716 880 ntBASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 AC091180.1-201ENST00000462104 372 ntBASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 AP000676.2-201ENST00000529711 301 ntBASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 Mico1.1-201ENST00000611698 204 ntBASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 AC015871.5-202ENST00000623252 701 ntBASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.22□□□□□ -1.57
RFWD3Q6PCD5 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.21□□□□□ -1.57
RFWD3Q6PCD5 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.21□□□□□ -1.57
RFWD3Q6PCD5 AC007996.1-201ENST00000620414 2821 ntBASIC5.21□□□□□ -1.57
RFWD3Q6PCD5 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFWD3Q6PCD5 IRF5P1-201ENST00000504852 2164 ntBASIC5.21□□□□□ -1.58
RFWD3Q6PCD5 CASC19-221ENST00000641309 1382 ntBASIC5.21□□□□□ -1.58
RFWD3Q6PCD5 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RFWD3Q6PCD5 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.21□□□□□ -1.58
RFWD3Q6PCD5 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFWD3Q6PCD5 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFWD3Q6PCD5 SNORA77-201ENST00000408716 125 ntBASIC5.21□□□□□ -1.58
RFWD3Q6PCD5 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms